Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd8Q09XV5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd8Q09XV5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd8Q09XV5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd8Q09XV5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chd8Q09XV5 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.07■□□□□ 0
Chd8Q09XV5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Chd8Q09XV5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd8Q09XV5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd8Q09XV5 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.07■□□□□ 0
Chd8Q09XV5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Chd8Q09XV5 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Chd8Q09XV5 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Chd8Q09XV5 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd8Q09XV5 Gm43474-201ENSMUST00000196415 774 ntBASIC15.07■□□□□ 0
Chd8Q09XV5 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.07■□□□□ 0
Chd8Q09XV5 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.07■□□□□ 0
Chd8Q09XV5 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.07■□□□□ 0
Chd8Q09XV5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Chd8Q09XV5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd8Q09XV5 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd8Q09XV5 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.07■□□□□ 0
Chd8Q09XV5 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Chd8Q09XV5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Chd8Q09XV5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.06■□□□□ 0
Chd8Q09XV5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd8Q09XV5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd8Q09XV5 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chd8Q09XV5 Gm27301-201ENSMUST00000184012 127 ntBASIC15.06■□□□□ 0
Chd8Q09XV5 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chd8Q09XV5 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chd8Q09XV5 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd8Q09XV5 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Chd8Q09XV5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.06■□□□□ 0
Chd8Q09XV5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.06■□□□□ 0
Chd8Q09XV5 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Chd8Q09XV5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chd8Q09XV5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd8Q09XV5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd8Q09XV5 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chd8Q09XV5 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chd8Q09XV5 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chd8Q09XV5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.06■□□□□ 0
Chd8Q09XV5 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chd8Q09XV5 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Chd8Q09XV5 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.06■□□□□ 0
Chd8Q09XV5 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.06■□□□□ 0
Chd8Q09XV5 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
Chd8Q09XV5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd8Q09XV5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chd8Q09XV5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
Chd8Q09XV5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chd8Q09XV5 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.05■□□□□ 0
Chd8Q09XV5 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.05■□□□□ 0
Chd8Q09XV5 Gm13829-201ENSMUST00000119600 138 ntBASIC15.05■□□□□ 0
Chd8Q09XV5 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.05■□□□□ 0
Chd8Q09XV5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.05■□□□□ 0
Chd8Q09XV5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chd8Q09XV5 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.05■□□□□ 0
Chd8Q09XV5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd8Q09XV5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd8Q09XV5 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.05■□□□□ -0
Chd8Q09XV5 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd8Q09XV5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd8Q09XV5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Chd8Q09XV5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd8Q09XV5 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.05■□□□□ -0
Chd8Q09XV5 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd8Q09XV5 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd8Q09XV5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Chd8Q09XV5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd8Q09XV5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd8Q09XV5 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd8Q09XV5 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd8Q09XV5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd8Q09XV5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd8Q09XV5 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.04■□□□□ -0
Chd8Q09XV5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd8Q09XV5 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Chd8Q09XV5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.04■□□□□ -0
Chd8Q09XV5 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chd8Q09XV5 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.04■□□□□ -0
Chd8Q09XV5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd8Q09XV5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.04■□□□□ -0
Chd8Q09XV5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd8Q09XV5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Chd8Q09XV5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd8Q09XV5 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd8Q09XV5 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.04■□□□□ -0
Chd8Q09XV5 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.04■□□□□ -0
Chd8Q09XV5 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chd8Q09XV5 Gm28631-201ENSMUST00000190740 334 ntBASIC15.04■□□□□ -0
Chd8Q09XV5 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd8Q09XV5 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd8Q09XV5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd8Q09XV5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chd8Q09XV5 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chd8Q09XV5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd8Q09XV5 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chd8Q09XV5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms