Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.06■□□□□ 0.96
Smarcc1P97496 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Smarcc1P97496 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarcc1P97496 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarcc1P97496 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcc1P97496 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcc1P97496 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Smarcc1P97496 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcc1P97496 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.05■□□□□ 0.96
Smarcc1P97496 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
Smarcc1P97496 Gm12350-201ENSMUST00000121208 462 ntBASIC21.05■□□□□ 0.96
Smarcc1P97496 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcc1P97496 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC21.05■□□□□ 0.96
Smarcc1P97496 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcc1P97496 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC21.05■□□□□ 0.96
Smarcc1P97496 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Smarcc1P97496 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.05■□□□□ 0.96
Smarcc1P97496 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcc1P97496 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcc1P97496 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcc1P97496 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcc1P97496 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc1P97496 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc1P97496 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.04■□□□□ 0.96
Smarcc1P97496 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc1P97496 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC21.04■□□□□ 0.96
Smarcc1P97496 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC21.04■□□□□ 0.96
Smarcc1P97496 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc1P97496 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC21.04■□□□□ 0.96
Smarcc1P97496 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc1P97496 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Smarcc1P97496 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc1P97496 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc1P97496 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc1P97496 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc1P97496 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc1P97496 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc1P97496 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcc1P97496 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC21.03■□□□□ 0.96
Smarcc1P97496 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Smarcc1P97496 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcc1P97496 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
Smarcc1P97496 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcc1P97496 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcc1P97496 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Smarcc1P97496 Gm43332-201ENSMUST00000202511 1044 ntBASIC21.03■□□□□ 0.96
Smarcc1P97496 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcc1P97496 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcc1P97496 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC21.03■□□□□ 0.96
Smarcc1P97496 Zfp264-201ENSMUST00000208656 1563 ntBASIC21.02■□□□□ 0.96
Smarcc1P97496 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
Smarcc1P97496 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcc1P97496 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcc1P97496 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC21.02■□□□□ 0.96
Smarcc1P97496 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC21.02■□□□□ 0.96
Smarcc1P97496 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC21.02■□□□□ 0.96
Smarcc1P97496 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC21.02■□□□□ 0.96
Smarcc1P97496 Gm5364-201ENSMUST00000216789 889 ntBASIC21.02■□□□□ 0.96
Smarcc1P97496 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcc1P97496 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcc1P97496 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcc1P97496 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcc1P97496 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smarcc1P97496 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smarcc1P97496 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smarcc1P97496 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcc1P97496 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcc1P97496 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcc1P97496 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcc1P97496 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcc1P97496 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcc1P97496 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcc1P97496 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC21.01■□□□□ 0.95
Smarcc1P97496 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC21.01■□□□□ 0.95
Smarcc1P97496 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcc1P97496 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Smarcc1P97496 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC21.01■□□□□ 0.95
Smarcc1P97496 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Smarcc1P97496 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Smarcc1P97496 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcc1P97496 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcc1P97496 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcc1P97496 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcc1P97496 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcc1P97496 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC21■□□□□ 0.95
Smarcc1P97496 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smarcc1P97496 Gm2213-201ENSMUST00000197485 688 ntBASIC21■□□□□ 0.95
Smarcc1P97496 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcc1P97496 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcc1P97496 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcc1P97496 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smarcc1P97496 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcc1P97496 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcc1P97496 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcc1P97496 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcc1P97496 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcc1P97496 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcc1P97496 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Smarcc1P97496 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcc1P97496 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms