Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh6P97326 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh6P97326 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh6P97326 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh6P97326 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh6P97326 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Cdh6P97326 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh6P97326 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Cdh6P97326 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh6P97326 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh6P97326 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh6P97326 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh6P97326 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh6P97326 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.08■□□□□ 0.32
Cdh6P97326 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh6P97326 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh6P97326 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh6P97326 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cdh6P97326 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.08■□□□□ 0.32
Cdh6P97326 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.08■□□□□ 0.32
Cdh6P97326 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Cdh6P97326 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh6P97326 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cdh6P97326 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cdh6P97326 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh6P97326 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cdh6P97326 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh6P97326 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh6P97326 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cdh6P97326 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh6P97326 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh6P97326 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh6P97326 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh6P97326 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh6P97326 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh6P97326 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.07■□□□□ 0.32
Cdh6P97326 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh6P97326 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.07■□□□□ 0.32
Cdh6P97326 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.07■□□□□ 0.32
Cdh6P97326 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh6P97326 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.07■□□□□ 0.32
Cdh6P97326 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh6P97326 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh6P97326 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh6P97326 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.07■□□□□ 0.32
Cdh6P97326 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh6P97326 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh6P97326 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh6P97326 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh6P97326 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh6P97326 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cdh6P97326 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh6P97326 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh6P97326 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh6P97326 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh6P97326 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh6P97326 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh6P97326 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh6P97326 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh6P97326 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cdh6P97326 Gm7213-201ENSMUST00000215977 950 ntBASIC17.06■□□□□ 0.32
Cdh6P97326 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh6P97326 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cdh6P97326 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh6P97326 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.06■□□□□ 0.32
Cdh6P97326 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh6P97326 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh6P97326 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh6P97326 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.06■□□□□ 0.32
Cdh6P97326 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh6P97326 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.06■□□□□ 0.32
Cdh6P97326 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh6P97326 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh6P97326 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh6P97326 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh6P97326 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdh6P97326 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh6P97326 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh6P97326 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh6P97326 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh6P97326 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh6P97326 Mir1668-201ENSMUST00000184114 107 ntBASIC17.05■□□□□ 0.32
Cdh6P97326 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh6P97326 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh6P97326 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh6P97326 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh6P97326 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdh6P97326 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh6P97326 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh6P97326 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh6P97326 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh6P97326 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh6P97326 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh6P97326 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh6P97326 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cdh6P97326 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh6P97326 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cdh6P97326 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cdh6P97326 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh6P97326 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms