Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.34■□□□□ 0.53
Trim43cP86449 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trim43cP86449 Gm18958-201ENSMUST00000174258 762 ntBASIC18.34■□□□□ 0.53
Trim43cP86449 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.34■□□□□ 0.53
Trim43cP86449 Gm2274-201ENSMUST00000184539 609 ntBASIC18.34■□□□□ 0.53
Trim43cP86449 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim43cP86449 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim43cP86449 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim43cP86449 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim43cP86449 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim43cP86449 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim43cP86449 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim43cP86449 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim43cP86449 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.33■□□□□ 0.52
Trim43cP86449 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trim43cP86449 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim43cP86449 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trim43cP86449 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim43cP86449 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim43cP86449 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trim43cP86449 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim43cP86449 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim43cP86449 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43cP86449 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43cP86449 Gm16061-201ENSMUST00000122167 857 ntBASIC18.32■□□□□ 0.52
Trim43cP86449 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43cP86449 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43cP86449 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43cP86449 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43cP86449 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43cP86449 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.32■□□□□ 0.52
Trim43cP86449 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43cP86449 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43cP86449 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43cP86449 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim43cP86449 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43cP86449 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim43cP86449 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43cP86449 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43cP86449 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43cP86449 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trim43cP86449 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Trim43cP86449 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43cP86449 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trim43cP86449 Gm6433-201ENSMUST00000118634 875 ntBASIC18.31■□□□□ 0.52
Trim43cP86449 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43cP86449 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43cP86449 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim43cP86449 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim43cP86449 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43cP86449 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43cP86449 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43cP86449 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43cP86449 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43cP86449 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43cP86449 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43cP86449 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.31■□□□□ 0.52
Trim43cP86449 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43cP86449 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43cP86449 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43cP86449 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim43cP86449 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43cP86449 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43cP86449 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43cP86449 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trim43cP86449 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43cP86449 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43cP86449 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trim43cP86449 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
Trim43cP86449 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trim43cP86449 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.3■□□□□ 0.52
Trim43cP86449 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43cP86449 Haglr-201ENSMUST00000100000 2085 ntBASIC18.3■□□□□ 0.52
Trim43cP86449 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.3■□□□□ 0.52
Trim43cP86449 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43cP86449 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43cP86449 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43cP86449 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43cP86449 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim43cP86449 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43cP86449 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43cP86449 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43cP86449 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43cP86449 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43cP86449 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43cP86449 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43cP86449 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.29■□□□□ 0.52
Trim43cP86449 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.29■□□□□ 0.52
Trim43cP86449 Gm45058-201ENSMUST00000205810 766 ntBASIC18.29■□□□□ 0.52
Trim43cP86449 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43cP86449 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trim43cP86449 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Trim43cP86449 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43cP86449 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43cP86449 Phf7-203ENSMUST00000226565 1971 ntBASIC18.29■□□□□ 0.52
Trim43cP86449 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43cP86449 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43cP86449 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim43cP86449 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trim43cP86449 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms