Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.73■□□□□ 0.27
Shox2P70390 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Shox2P70390 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shox2P70390 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shox2P70390 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Shox2P70390 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shox2P70390 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Shox2P70390 Gm13234-201ENSMUST00000120010 747 ntBASIC16.73■□□□□ 0.27
Shox2P70390 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.73■□□□□ 0.27
Shox2P70390 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.73■□□□□ 0.27
Shox2P70390 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shox2P70390 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shox2P70390 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Shox2P70390 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shox2P70390 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shox2P70390 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shox2P70390 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Shox2P70390 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shox2P70390 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Shox2P70390 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.72■□□□□ 0.27
Shox2P70390 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shox2P70390 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shox2P70390 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Shox2P70390 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Shox2P70390 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Shox2P70390 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Shox2P70390 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shox2P70390 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Shox2P70390 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Shox2P70390 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Shox2P70390 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shox2P70390 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.72■□□□□ 0.27
Shox2P70390 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shox2P70390 Gm42778-201ENSMUST00000199644 553 ntBASIC16.72■□□□□ 0.27
Shox2P70390 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shox2P70390 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shox2P70390 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shox2P70390 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.72■□□□□ 0.27
Shox2P70390 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Shox2P70390 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shox2P70390 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Shox2P70390 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Shox2P70390 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.72■□□□□ 0.27
Shox2P70390 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shox2P70390 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shox2P70390 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shox2P70390 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
Shox2P70390 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shox2P70390 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shox2P70390 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Shox2P70390 Gm21956-201ENSMUST00000179946 522 ntBASIC16.71■□□□□ 0.27
Shox2P70390 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Shox2P70390 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.71■□□□□ 0.27
Shox2P70390 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shox2P70390 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shox2P70390 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Shox2P70390 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Shox2P70390 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shox2P70390 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shox2P70390 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shox2P70390 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.7■□□□□ 0.26
Shox2P70390 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shox2P70390 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.7■□□□□ 0.26
Shox2P70390 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shox2P70390 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shox2P70390 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shox2P70390 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Shox2P70390 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shox2P70390 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shox2P70390 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shox2P70390 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shox2P70390 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shox2P70390 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Shox2P70390 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.7■□□□□ 0.26
Shox2P70390 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.7■□□□□ 0.26
Shox2P70390 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shox2P70390 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
Shox2P70390 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shox2P70390 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shox2P70390 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.69■□□□□ 0.26
Shox2P70390 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shox2P70390 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.69■□□□□ 0.26
Shox2P70390 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shox2P70390 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shox2P70390 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shox2P70390 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shox2P70390 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shox2P70390 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shox2P70390 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Shox2P70390 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.69■□□□□ 0.26
Shox2P70390 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Shox2P70390 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.69■□□□□ 0.26
Shox2P70390 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shox2P70390 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shox2P70390 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shox2P70390 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shox2P70390 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shox2P70390 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shox2P70390 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shox2P70390 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms