Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.04□□□□□ -0.16
Pdlim4P70271 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim4P70271 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.04□□□□□ -0.16
Pdlim4P70271 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim4P70271 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim4P70271 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.03□□□□□ -0.16
Pdlim4P70271 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim4P70271 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim4P70271 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim4P70271 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.03□□□□□ -0.16
Pdlim4P70271 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim4P70271 Gm17661-201ENSMUST00000170317 270 ntBASIC14.03□□□□□ -0.16
Pdlim4P70271 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim4P70271 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim4P70271 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim4P70271 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim4P70271 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim4P70271 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim4P70271 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdlim4P70271 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pdlim4P70271 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Pdlim4P70271 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pdlim4P70271 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pdlim4P70271 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdlim4P70271 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pdlim4P70271 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pdlim4P70271 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim4P70271 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim4P70271 Gm15565-201ENSMUST00000118890 427 ntBASIC14.02□□□□□ -0.17
Pdlim4P70271 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim4P70271 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim4P70271 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim4P70271 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim4P70271 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim4P70271 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim4P70271 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim4P70271 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim4P70271 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pdlim4P70271 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim4P70271 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim4P70271 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim4P70271 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pdlim4P70271 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim4P70271 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim4P70271 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pdlim4P70271 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pdlim4P70271 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim4P70271 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pdlim4P70271 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim4P70271 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim4P70271 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim4P70271 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.01□□□□□ -0.17
Pdlim4P70271 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim4P70271 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim4P70271 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim4P70271 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim4P70271 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim4P70271 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pdlim4P70271 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim4P70271 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.01□□□□□ -0.17
Pdlim4P70271 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim4P70271 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim4P70271 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim4P70271 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim4P70271 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pdlim4P70271 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim4P70271 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim4P70271 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Pdlim4P70271 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim4P70271 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim4P70271 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim4P70271 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pdlim4P70271 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pdlim4P70271 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim4P70271 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pdlim4P70271 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim4P70271 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14□□□□□ -0.17
Pdlim4P70271 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim4P70271 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim4P70271 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pdlim4P70271 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pdlim4P70271 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim4P70271 Gm28265-201ENSMUST00000188201 2319 ntBASIC14□□□□□ -0.17
Pdlim4P70271 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pdlim4P70271 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14□□□□□ -0.17
Pdlim4P70271 Gm43353-201ENSMUST00000199224 1295 ntBASIC14□□□□□ -0.17
Pdlim4P70271 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14□□□□□ -0.17
Pdlim4P70271 Gm7791-201ENSMUST00000219066 539 ntBASIC14□□□□□ -0.17
Pdlim4P70271 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pdlim4P70271 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pdlim4P70271 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pdlim4P70271 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim4P70271 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim4P70271 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim4P70271 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim4P70271 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim4P70271 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14□□□□□ -0.17
Pdlim4P70271 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Pdlim4P70271 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim4P70271 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms