Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Crnkl1P63154 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Crnkl1P63154 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Crnkl1P63154 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Crnkl1P63154 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Crnkl1P63154 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Crnkl1P63154 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Crnkl1P63154 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Crnkl1P63154 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Crnkl1P63154 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Crnkl1P63154 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Crnkl1P63154 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Crnkl1P63154 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
Crnkl1P63154 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Crnkl1P63154 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Crnkl1P63154 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Crnkl1P63154 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Crnkl1P63154 Gm6211-202ENSMUST00000167849 925 ntBASIC16.72■□□□□ 0.27
Crnkl1P63154 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Crnkl1P63154 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Crnkl1P63154 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Crnkl1P63154 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Crnkl1P63154 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Crnkl1P63154 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Crnkl1P63154 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Crnkl1P63154 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Crnkl1P63154 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Crnkl1P63154 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Crnkl1P63154 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Crnkl1P63154 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Crnkl1P63154 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Crnkl1P63154 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Crnkl1P63154 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Crnkl1P63154 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Crnkl1P63154 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Crnkl1P63154 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Crnkl1P63154 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Crnkl1P63154 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.71■□□□□ 0.27
Crnkl1P63154 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Crnkl1P63154 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.71■□□□□ 0.27
Crnkl1P63154 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Crnkl1P63154 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Crnkl1P63154 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Crnkl1P63154 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.71■□□□□ 0.27
Crnkl1P63154 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Crnkl1P63154 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
Crnkl1P63154 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Crnkl1P63154 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.7■□□□□ 0.26
Crnkl1P63154 Mir8112-201ENSMUST00000184382 131 ntBASIC16.7■□□□□ 0.26
Crnkl1P63154 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Crnkl1P63154 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Crnkl1P63154 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.69■□□□□ 0.26
Crnkl1P63154 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Crnkl1P63154 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Crnkl1P63154 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.69■□□□□ 0.26
Crnkl1P63154 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Crnkl1P63154 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Crnkl1P63154 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Crnkl1P63154 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Crnkl1P63154 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Crnkl1P63154 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.69■□□□□ 0.26
Crnkl1P63154 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Crnkl1P63154 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.69■□□□□ 0.26
Crnkl1P63154 Gm5408-201ENSMUST00000197998 747 ntBASIC16.69■□□□□ 0.26
Crnkl1P63154 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.69■□□□□ 0.26
Crnkl1P63154 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Crnkl1P63154 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Crnkl1P63154 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Crnkl1P63154 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Crnkl1P63154 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Crnkl1P63154 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Crnkl1P63154 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Crnkl1P63154 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Crnkl1P63154 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Crnkl1P63154 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Crnkl1P63154 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Crnkl1P63154 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.68■□□□□ 0.26
Crnkl1P63154 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Crnkl1P63154 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.68■□□□□ 0.26
Crnkl1P63154 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Crnkl1P63154 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms