Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.06■□□□□ 0.32
ThraP63058 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ThraP63058 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ThraP63058 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ThraP63058 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ThraP63058 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ThraP63058 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ThraP63058 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.06■□□□□ 0.32
ThraP63058 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ThraP63058 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.06■□□□□ 0.32
ThraP63058 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ThraP63058 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ThraP63058 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ThraP63058 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ThraP63058 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ThraP63058 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ThraP63058 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ThraP63058 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ThraP63058 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ThraP63058 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ThraP63058 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ThraP63058 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ThraP63058 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.05■□□□□ 0.32
ThraP63058 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.05■□□□□ 0.32
ThraP63058 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.05■□□□□ 0.32
ThraP63058 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ThraP63058 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ThraP63058 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ThraP63058 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ThraP63058 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ThraP63058 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ThraP63058 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ThraP63058 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ThraP63058 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ThraP63058 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ThraP63058 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ThraP63058 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ThraP63058 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ThraP63058 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ThraP63058 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ThraP63058 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ThraP63058 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ThraP63058 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ThraP63058 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ThraP63058 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.04■□□□□ 0.32
ThraP63058 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ThraP63058 Gm38027-201ENSMUST00000192315 235 ntBASIC17.04■□□□□ 0.32
ThraP63058 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.04■□□□□ 0.32
ThraP63058 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.04■□□□□ 0.32
ThraP63058 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ThraP63058 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ThraP63058 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ThraP63058 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ThraP63058 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ThraP63058 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ThraP63058 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ThraP63058 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ThraP63058 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ThraP63058 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ThraP63058 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ThraP63058 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ThraP63058 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ThraP63058 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ThraP63058 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ThraP63058 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ThraP63058 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ThraP63058 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.03■□□□□ 0.32
ThraP63058 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.03■□□□□ 0.32
ThraP63058 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ThraP63058 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ThraP63058 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ThraP63058 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ThraP63058 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ThraP63058 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ThraP63058 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ThraP63058 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ThraP63058 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ThraP63058 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ThraP63058 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
ThraP63058 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
ThraP63058 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ThraP63058 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ThraP63058 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ThraP63058 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.02■□□□□ 0.32
ThraP63058 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ThraP63058 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ThraP63058 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.02■□□□□ 0.32
ThraP63058 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ThraP63058 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ThraP63058 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.02■□□□□ 0.32
ThraP63058 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
ThraP63058 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ThraP63058 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ThraP63058 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ThraP63058 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ThraP63058 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ThraP63058 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ThraP63058 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ThraP63058 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ThraP63058 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms