Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a1P61620 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a1P61620 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a1P61620 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a1P61620 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a1P61620 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.86□□□□□ -0.03
Sec61a1P61620 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a1P61620 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a1P61620 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a1P61620 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a1P61620 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a1P61620 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a1P61620 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Sec61a1P61620 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a1P61620 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a1P61620 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a1P61620 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a1P61620 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Sec61a1P61620 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a1P61620 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a1P61620 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a1P61620 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.85□□□□□ -0.03
Sec61a1P61620 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.85□□□□□ -0.03
Sec61a1P61620 Gm15378-201ENSMUST00000121894 207 ntBASIC14.85□□□□□ -0.03
Sec61a1P61620 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Sec61a1P61620 Gm38285-201ENSMUST00000192928 922 ntBASIC14.85□□□□□ -0.03
Sec61a1P61620 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sec61a1P61620 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a1P61620 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a1P61620 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.85□□□□□ -0.03
Sec61a1P61620 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a1P61620 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.85□□□□□ -0.03
Sec61a1P61620 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.85□□□□□ -0.03
Sec61a1P61620 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a1P61620 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a1P61620 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a1P61620 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sec61a1P61620 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.84□□□□□ -0.03
Sec61a1P61620 Idnk-204ENSMUST00000226010 1898 ntBASIC14.84□□□□□ -0.03
Sec61a1P61620 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Sec61a1P61620 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a1P61620 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a1P61620 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a1P61620 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a1P61620 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.84□□□□□ -0.03
Sec61a1P61620 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.84□□□□□ -0.03
Sec61a1P61620 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.84□□□□□ -0.03
Sec61a1P61620 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.84□□□□□ -0.03
Sec61a1P61620 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a1P61620 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a1P61620 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a1P61620 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a1P61620 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sec61a1P61620 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a1P61620 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a1P61620 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Sec61a1P61620 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sec61a1P61620 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sec61a1P61620 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sec61a1P61620 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sec61a1P61620 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Sec61a1P61620 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sec61a1P61620 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sec61a1P61620 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Sec61a1P61620 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.83□□□□□ -0.04
Sec61a1P61620 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Sec61a1P61620 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.83□□□□□ -0.04
Sec61a1P61620 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Sec61a1P61620 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.83□□□□□ -0.04
Sec61a1P61620 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.83□□□□□ -0.04
Sec61a1P61620 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.83□□□□□ -0.04
Sec61a1P61620 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.83□□□□□ -0.04
Sec61a1P61620 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.83□□□□□ -0.04
Sec61a1P61620 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a1P61620 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a1P61620 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Sec61a1P61620 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.82□□□□□ -0.04
Sec61a1P61620 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a1P61620 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms