Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Cks1bP61025 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.07□□□□□ -0.48
Cks1bP61025 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.06□□□□□ -0.48
Cks1bP61025 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Cks1bP61025 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Gm27454-201ENSMUST00000185090 204 ntBASIC12.06□□□□□ -0.48
Cks1bP61025 Gm43017-201ENSMUST00000198296 752 ntBASIC12.06□□□□□ -0.48
Cks1bP61025 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Gm6139-201ENSMUST00000079261 882 ntBASIC12.06□□□□□ -0.48
Cks1bP61025 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cks1bP61025 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1bP61025 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cks1bP61025 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1bP61025 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1bP61025 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1bP61025 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Cks1bP61025 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.05□□□□□ -0.48
Cks1bP61025 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.05□□□□□ -0.48
Cks1bP61025 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.05□□□□□ -0.48
Cks1bP61025 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1bP61025 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1bP61025 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Cks1bP61025 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cks1bP61025 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cks1bP61025 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1bP61025 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1bP61025 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC12.05□□□□□ -0.48
Cks1bP61025 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC12.05□□□□□ -0.48
Cks1bP61025 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1bP61025 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1bP61025 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cks1bP61025 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1bP61025 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1bP61025 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1bP61025 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cks1bP61025 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1bP61025 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1bP61025 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1bP61025 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1bP61025 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.04□□□□□ -0.48
Cks1bP61025 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC12.04□□□□□ -0.48
Cks1bP61025 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cks1bP61025 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1bP61025 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.03□□□□□ -0.48
Cks1bP61025 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1bP61025 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1bP61025 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC12.03□□□□□ -0.48
Cks1bP61025 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cks1bP61025 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1bP61025 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1bP61025 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms