Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sf3b6P59708 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b6P59708 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b6P59708 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b6P59708 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b6P59708 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b6P59708 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Sf3b6P59708 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.98□□□□□ -0.01
Sf3b6P59708 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.98□□□□□ -0.01
Sf3b6P59708 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Mir6349-201ENSMUST00000184059 97 ntBASIC14.98□□□□□ -0.01
Sf3b6P59708 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Sf3b6P59708 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sf3b6P59708 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.98□□□□□ -0.01
Sf3b6P59708 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sf3b6P59708 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.97□□□□□ -0.01
Sf3b6P59708 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Sf3b6P59708 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
Sf3b6P59708 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Sf3b6P59708 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.97□□□□□ -0.01
Sf3b6P59708 Rab3c-203ENSMUST00000224180 967 ntBASIC14.97□□□□□ -0.01
Sf3b6P59708 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Sf3b6P59708 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
Sf3b6P59708 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.97□□□□□ -0.01
Sf3b6P59708 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.97□□□□□ -0.01
Sf3b6P59708 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sf3b6P59708 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b6P59708 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b6P59708 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.96□□□□□ -0.01
Sf3b6P59708 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b6P59708 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b6P59708 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b6P59708 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b6P59708 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b6P59708 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b6P59708 Gm6576-201ENSMUST00000169678 883 ntBASIC14.96□□□□□ -0.01
Sf3b6P59708 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.96□□□□□ -0.01
Sf3b6P59708 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.96□□□□□ -0.01
Sf3b6P59708 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b6P59708 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b6P59708 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
Sf3b6P59708 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b6P59708 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b6P59708 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b6P59708 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sf3b6P59708 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sf3b6P59708 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Sf3b6P59708 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sf3b6P59708 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sf3b6P59708 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.95□□□□□ -0.02
Sf3b6P59708 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.95□□□□□ -0.02
Sf3b6P59708 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b6P59708 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b6P59708 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Sf3b6P59708 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b6P59708 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b6P59708 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b6P59708 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b6P59708 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b6P59708 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sf3b6P59708 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms