Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm1P58771 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm1P58771 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm1P58771 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm1P58771 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm1P58771 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm1P58771 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm1P58771 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm1P58771 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC18.84■□□□□ 0.61
Tpm1P58771 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm1P58771 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm1P58771 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Tpm1P58771 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm1P58771 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm1P58771 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm1P58771 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Tpm1P58771 Gm11643-201ENSMUST00000119578 864 ntBASIC18.84■□□□□ 0.61
Tpm1P58771 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm1P58771 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.84■□□□□ 0.61
Tpm1P58771 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm1P58771 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm1P58771 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm1P58771 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm1P58771 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm1P58771 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm1P58771 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.83■□□□□ 0.61
Tpm1P58771 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm1P58771 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm1P58771 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.83■□□□□ 0.61
Tpm1P58771 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Tpm1P58771 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.83■□□□□ 0.6
Tpm1P58771 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm1P58771 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm1P58771 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm1P58771 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm1P58771 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.83■□□□□ 0.6
Tpm1P58771 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm1P58771 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.83■□□□□ 0.6
Tpm1P58771 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm1P58771 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm1P58771 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm1P58771 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm1P58771 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tpm1P58771 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm1P58771 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm1P58771 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.82■□□□□ 0.6
Tpm1P58771 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.82■□□□□ 0.6
Tpm1P58771 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
Tpm1P58771 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tpm1P58771 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm1P58771 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm1P58771 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm1P58771 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm1P58771 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm1P58771 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm1P58771 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm1P58771 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm1P58771 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm1P58771 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tpm1P58771 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm1P58771 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm1P58771 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tpm1P58771 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm1P58771 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm1P58771 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm1P58771 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm1P58771 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Tpm1P58771 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm1P58771 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.81■□□□□ 0.6
Tpm1P58771 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm1P58771 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm1P58771 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tpm1P58771 Gm11927-201ENSMUST00000118472 759 ntBASIC18.81■□□□□ 0.6
Tpm1P58771 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm1P58771 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm1P58771 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm1P58771 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm1P58771 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm1P58771 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm1P58771 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Tpm1P58771 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm1P58771 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm1P58771 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm1P58771 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm1P58771 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm1P58771 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm1P58771 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm1P58771 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm1P58771 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm1P58771 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm1P58771 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm1P58771 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm1P58771 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tpm1P58771 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm1P58771 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm1P58771 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm1P58771 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.8■□□□□ 0.6
Tpm1P58771 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm1P58771 Mir6349-201ENSMUST00000184059 97 ntBASIC18.8■□□□□ 0.6
Tpm1P58771 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms