Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp20P57748 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Mmp20P57748 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Mmp20P57748 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Mmp20P57748 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mmp20P57748 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp20P57748 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp20P57748 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp20P57748 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp20P57748 Gm44430-201ENSMUST00000203376 995 ntBASIC19.26■□□□□ 0.67
Mmp20P57748 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Mmp20P57748 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.26■□□□□ 0.67
Mmp20P57748 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Mmp20P57748 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Mmp20P57748 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.26■□□□□ 0.67
Mmp20P57748 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp20P57748 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Mmp20P57748 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Mmp20P57748 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp20P57748 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp20P57748 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp20P57748 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp20P57748 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.25■□□□□ 0.67
Mmp20P57748 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp20P57748 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp20P57748 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Mmp20P57748 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp20P57748 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp20P57748 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp20P57748 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.25■□□□□ 0.67
Mmp20P57748 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp20P57748 Gm44357-201ENSMUST00000195897 142 ntBASIC19.25■□□□□ 0.67
Mmp20P57748 Gm19658-201ENSMUST00000196231 138 ntBASIC19.25■□□□□ 0.67
Mmp20P57748 Gm44367-201ENSMUST00000196836 138 ntBASIC19.25■□□□□ 0.67
Mmp20P57748 Gm44350-201ENSMUST00000197197 138 ntBASIC19.25■□□□□ 0.67
Mmp20P57748 Gm44390-201ENSMUST00000197533 144 ntBASIC19.25■□□□□ 0.67
Mmp20P57748 Gm44313-201ENSMUST00000198018 138 ntBASIC19.25■□□□□ 0.67
Mmp20P57748 Gm44486-201ENSMUST00000198508 138 ntBASIC19.25■□□□□ 0.67
Mmp20P57748 Gm44314-201ENSMUST00000199263 138 ntBASIC19.25■□□□□ 0.67
Mmp20P57748 Gm44394-201ENSMUST00000199558 138 ntBASIC19.25■□□□□ 0.67
Mmp20P57748 Gm44484-201ENSMUST00000199873 138 ntBASIC19.25■□□□□ 0.67
Mmp20P57748 Gm44466-201ENSMUST00000200264 138 ntBASIC19.25■□□□□ 0.67
Mmp20P57748 Gm44359-201ENSMUST00000200671 138 ntBASIC19.25■□□□□ 0.67
Mmp20P57748 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.25■□□□□ 0.67
Mmp20P57748 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp20P57748 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.25■□□□□ 0.67
Mmp20P57748 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp20P57748 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp20P57748 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Mmp20P57748 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp20P57748 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp20P57748 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp20P57748 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp20P57748 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp20P57748 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp20P57748 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp20P57748 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Mmp20P57748 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp20P57748 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Mmp20P57748 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp20P57748 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.24■□□□□ 0.67
Mmp20P57748 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Mmp20P57748 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.24■□□□□ 0.67
Mmp20P57748 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp20P57748 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.24■□□□□ 0.67
Mmp20P57748 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.24■□□□□ 0.67
Mmp20P57748 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp20P57748 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp20P57748 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Mmp20P57748 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp20P57748 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp20P57748 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.23■□□□□ 0.67
Mmp20P57748 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp20P57748 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.23■□□□□ 0.67
Mmp20P57748 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.23■□□□□ 0.67
Mmp20P57748 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Mmp20P57748 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp20P57748 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp20P57748 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp20P57748 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp20P57748 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp20P57748 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp20P57748 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp20P57748 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp20P57748 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.22■□□□□ 0.67
Mmp20P57748 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp20P57748 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp20P57748 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp20P57748 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Mmp20P57748 Gm25925-201ENSMUST00000158314 306 ntBASIC19.22■□□□□ 0.67
Mmp20P57748 Mir5131-201ENSMUST00000175426 93 ntBASIC19.22■□□□□ 0.67
Mmp20P57748 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.22■□□□□ 0.67
Mmp20P57748 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp20P57748 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.22■□□□□ 0.67
Mmp20P57748 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.22■□□□□ 0.67
Mmp20P57748 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp20P57748 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp20P57748 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Mmp20P57748 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp20P57748 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms