Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
NcanP55066 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NcanP55066 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NcanP55066 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.8■□□□□ 0.44
NcanP55066 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.8■□□□□ 0.44
NcanP55066 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NcanP55066 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NcanP55066 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NcanP55066 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NcanP55066 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NcanP55066 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NcanP55066 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NcanP55066 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NcanP55066 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NcanP55066 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NcanP55066 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NcanP55066 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NcanP55066 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NcanP55066 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NcanP55066 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NcanP55066 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NcanP55066 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NcanP55066 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NcanP55066 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.79■□□□□ 0.44
NcanP55066 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NcanP55066 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NcanP55066 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NcanP55066 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.79■□□□□ 0.44
NcanP55066 Gm44430-201ENSMUST00000203376 995 ntBASIC17.79■□□□□ 0.44
NcanP55066 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.79■□□□□ 0.44
NcanP55066 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NcanP55066 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NcanP55066 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NcanP55066 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NcanP55066 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.79■□□□□ 0.44
NcanP55066 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NcanP55066 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NcanP55066 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NcanP55066 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NcanP55066 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NcanP55066 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NcanP55066 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NcanP55066 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NcanP55066 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NcanP55066 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NcanP55066 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NcanP55066 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NcanP55066 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NcanP55066 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NcanP55066 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.78■□□□□ 0.44
NcanP55066 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NcanP55066 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NcanP55066 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NcanP55066 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.78■□□□□ 0.44
NcanP55066 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NcanP55066 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.78■□□□□ 0.44
NcanP55066 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NcanP55066 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NcanP55066 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.78■□□□□ 0.44
NcanP55066 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NcanP55066 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.77■□□□□ 0.44
NcanP55066 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.77■□□□□ 0.44
NcanP55066 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NcanP55066 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NcanP55066 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NcanP55066 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NcanP55066 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NcanP55066 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.77■□□□□ 0.44
NcanP55066 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NcanP55066 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.77■□□□□ 0.44
NcanP55066 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NcanP55066 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.77■□□□□ 0.44
NcanP55066 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.77■□□□□ 0.44
NcanP55066 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NcanP55066 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NcanP55066 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NcanP55066 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.43
NcanP55066 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NcanP55066 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NcanP55066 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
NcanP55066 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
NcanP55066 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NcanP55066 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NcanP55066 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NcanP55066 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NcanP55066 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NcanP55066 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.76■□□□□ 0.43
NcanP55066 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.76■□□□□ 0.43
NcanP55066 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NcanP55066 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NcanP55066 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NcanP55066 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NcanP55066 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.76■□□□□ 0.43
NcanP55066 Gm11025-201ENSMUST00000140773 466 ntBASIC17.76■□□□□ 0.43
NcanP55066 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NcanP55066 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.76■□□□□ 0.43
NcanP55066 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NcanP55066 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NcanP55066 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NcanP55066 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms