Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atxn1P54254 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atxn1P54254 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Atxn1P54254 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atxn1P54254 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Atxn1P54254 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.7■□□□□ 0.26
Atxn1P54254 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Atxn1P54254 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atxn1P54254 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.7■□□□□ 0.26
Atxn1P54254 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atxn1P54254 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Atxn1P54254 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atxn1P54254 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atxn1P54254 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Atxn1P54254 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atxn1P54254 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atxn1P54254 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atxn1P54254 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atxn1P54254 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atxn1P54254 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atxn1P54254 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atxn1P54254 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atxn1P54254 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atxn1P54254 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atxn1P54254 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atxn1P54254 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atxn1P54254 Gm15794-201ENSMUST00000120182 631 ntBASIC16.69■□□□□ 0.26
Atxn1P54254 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.69■□□□□ 0.26
Atxn1P54254 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atxn1P54254 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atxn1P54254 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.69■□□□□ 0.26
Atxn1P54254 Gm2651-201ENSMUST00000203560 838 ntBASIC16.69■□□□□ 0.26
Atxn1P54254 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.69■□□□□ 0.26
Atxn1P54254 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.69■□□□□ 0.26
Atxn1P54254 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.69■□□□□ 0.26
Atxn1P54254 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atxn1P54254 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atxn1P54254 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.69■□□□□ 0.26
Atxn1P54254 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Atxn1P54254 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atxn1P54254 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atxn1P54254 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atxn1P54254 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.69■□□□□ 0.26
Atxn1P54254 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atxn1P54254 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.68■□□□□ 0.26
Atxn1P54254 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Atxn1P54254 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atxn1P54254 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atxn1P54254 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atxn1P54254 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atxn1P54254 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.68■□□□□ 0.26
Atxn1P54254 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atxn1P54254 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atxn1P54254 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.68■□□□□ 0.26
Atxn1P54254 Gm2213-201ENSMUST00000197485 688 ntBASIC16.68■□□□□ 0.26
Atxn1P54254 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.68■□□□□ 0.26
Atxn1P54254 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atxn1P54254 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atxn1P54254 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atxn1P54254 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atxn1P54254 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atxn1P54254 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atxn1P54254 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atxn1P54254 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atxn1P54254 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atxn1P54254 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atxn1P54254 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atxn1P54254 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.67■□□□□ 0.26
Atxn1P54254 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atxn1P54254 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.67■□□□□ 0.26
Atxn1P54254 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atxn1P54254 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.67■□□□□ 0.26
Atxn1P54254 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atxn1P54254 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Atxn1P54254 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atxn1P54254 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atxn1P54254 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Atxn1P54254 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Atxn1P54254 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Atxn1P54254 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atxn1P54254 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atxn1P54254 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.67■□□□□ 0.26
Atxn1P54254 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atxn1P54254 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atxn1P54254 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atxn1P54254 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.67■□□□□ 0.26
Atxn1P54254 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atxn1P54254 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atxn1P54254 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atxn1P54254 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atxn1P54254 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atxn1P54254 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atxn1P54254 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atxn1P54254 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Atxn1P54254 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atxn1P54254 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.66■□□□□ 0.26
Atxn1P54254 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.66■□□□□ 0.26
Atxn1P54254 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Atxn1P54254 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atxn1P54254 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms