Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx3P50481 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx3P50481 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.1■□□□□ 0.33
Lhx3P50481 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.1■□□□□ 0.33
Lhx3P50481 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx3P50481 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Lhx3P50481 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx3P50481 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx3P50481 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.1■□□□□ 0.33
Lhx3P50481 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx3P50481 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx3P50481 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx3P50481 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx3P50481 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx3P50481 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.1■□□□□ 0.33
Lhx3P50481 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx3P50481 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx3P50481 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx3P50481 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Lhx3P50481 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx3P50481 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.09■□□□□ 0.33
Lhx3P50481 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx3P50481 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx3P50481 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx3P50481 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.09■□□□□ 0.33
Lhx3P50481 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.09■□□□□ 0.33
Lhx3P50481 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.09■□□□□ 0.33
Lhx3P50481 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.09■□□□□ 0.33
Lhx3P50481 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx3P50481 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.09■□□□□ 0.33
Lhx3P50481 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.09■□□□□ 0.33
Lhx3P50481 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx3P50481 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx3P50481 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Lhx3P50481 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Lhx3P50481 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.09■□□□□ 0.33
Lhx3P50481 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.09■□□□□ 0.33
Lhx3P50481 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx3P50481 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.09■□□□□ 0.33
Lhx3P50481 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.09■□□□□ 0.33
Lhx3P50481 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.09■□□□□ 0.33
Lhx3P50481 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx3P50481 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx3P50481 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx3P50481 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx3P50481 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.08■□□□□ 0.32
Lhx3P50481 Gm25016-201ENSMUST00000158399 131 ntBASIC17.08■□□□□ 0.32
Lhx3P50481 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.08■□□□□ 0.32
Lhx3P50481 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx3P50481 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx3P50481 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx3P50481 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Lhx3P50481 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx3P50481 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx3P50481 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Lhx3P50481 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Lhx3P50481 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx3P50481 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx3P50481 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx3P50481 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx3P50481 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx3P50481 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx3P50481 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx3P50481 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx3P50481 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx3P50481 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx3P50481 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx3P50481 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Lhx3P50481 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Lhx3P50481 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx3P50481 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx3P50481 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx3P50481 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx3P50481 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Lhx3P50481 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx3P50481 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx3P50481 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.07■□□□□ 0.32
Lhx3P50481 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx3P50481 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx3P50481 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx3P50481 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx3P50481 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.07■□□□□ 0.32
Lhx3P50481 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx3P50481 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx3P50481 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.06■□□□□ 0.32
Lhx3P50481 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx3P50481 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx3P50481 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Lhx3P50481 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx3P50481 Mir770-201ENSMUST00000103252 94 ntBASIC17.06■□□□□ 0.32
Lhx3P50481 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx3P50481 Gm18421-201ENSMUST00000204122 625 ntBASIC17.06■□□□□ 0.32
Lhx3P50481 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.06■□□□□ 0.32
Lhx3P50481 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx3P50481 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Lhx3P50481 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Lhx3P50481 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx3P50481 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.06■□□□□ 0.32
Lhx3P50481 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Lhx3P50481 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms