Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.29■□□□□ 0.84
Nedd4P46935 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nedd4P46935 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nedd4P46935 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nedd4P46935 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Nedd4P46935 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nedd4P46935 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nedd4P46935 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Nedd4P46935 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nedd4P46935 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nedd4P46935 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nedd4P46935 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nedd4P46935 Gm26308-201ENSMUST00000157768 69 ntBASIC20.28■□□□□ 0.84
Nedd4P46935 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.28■□□□□ 0.84
Nedd4P46935 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nedd4P46935 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.28■□□□□ 0.84
Nedd4P46935 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nedd4P46935 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nedd4P46935 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.27■□□□□ 0.84
Nedd4P46935 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nedd4P46935 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nedd4P46935 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nedd4P46935 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nedd4P46935 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Nedd4P46935 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Nedd4P46935 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.27■□□□□ 0.84
Nedd4P46935 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nedd4P46935 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nedd4P46935 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.27■□□□□ 0.84
Nedd4P46935 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.27■□□□□ 0.84
Nedd4P46935 AC090659.1-201ENSMUST00000224334 768 ntBASIC20.27■□□□□ 0.84
Nedd4P46935 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Nedd4P46935 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.27■□□□□ 0.84
Nedd4P46935 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nedd4P46935 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nedd4P46935 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Nedd4P46935 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nedd4P46935 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nedd4P46935 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.26■□□□□ 0.83
Nedd4P46935 Gm4535-201ENSMUST00000182274 558 ntBASIC20.26■□□□□ 0.83
Nedd4P46935 Gm6089-201ENSMUST00000197666 938 ntBASIC20.26■□□□□ 0.83
Nedd4P46935 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
Nedd4P46935 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.26■□□□□ 0.83
Nedd4P46935 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nedd4P46935 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nedd4P46935 Gm10355-201ENSMUST00000097146 517 ntBASIC20.26■□□□□ 0.83
Nedd4P46935 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nedd4P46935 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nedd4P46935 Fst-202ENSMUST00000223640 2612 ntBASIC20.25■□□□□ 0.83
Nedd4P46935 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Nedd4P46935 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nedd4P46935 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.25■□□□□ 0.83
Nedd4P46935 AC151286.1-201ENSMUST00000198489 145 ntBASIC20.25■□□□□ 0.83
Nedd4P46935 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.25■□□□□ 0.83
Nedd4P46935 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nedd4P46935 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nedd4P46935 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nedd4P46935 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nedd4P46935 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nedd4P46935 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nedd4P46935 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nedd4P46935 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nedd4P46935 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Nedd4P46935 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.24■□□□□ 0.83
Nedd4P46935 Gm14057-201ENSMUST00000120631 482 ntBASIC20.24■□□□□ 0.83
Nedd4P46935 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.24■□□□□ 0.83
Nedd4P46935 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nedd4P46935 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nedd4P46935 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Nedd4P46935 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nedd4P46935 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nedd4P46935 Gm45683-201ENSMUST00000210825 1247 ntBASIC20.24■□□□□ 0.83
Nedd4P46935 Gm5186-201ENSMUST00000218781 920 ntBASIC20.24■□□□□ 0.83
Nedd4P46935 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.24■□□□□ 0.83
Nedd4P46935 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nedd4P46935 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nedd4P46935 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nedd4P46935 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Nedd4P46935 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nedd4P46935 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nedd4P46935 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nedd4P46935 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nedd4P46935 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Nedd4P46935 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nedd4P46935 Gm25911-201ENSMUST00000157621 56 ntBASIC20.23■□□□□ 0.83
Nedd4P46935 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.23■□□□□ 0.83
Nedd4P46935 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.23■□□□□ 0.83
Nedd4P46935 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Nedd4P46935 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nedd4P46935 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nedd4P46935 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nedd4P46935 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Nedd4P46935 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nedd4P46935 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nedd4P46935 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nedd4P46935 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nedd4P46935 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nedd4P46935 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nedd4P46935 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nedd4P46935 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms