Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdc2P43407 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sdc2P43407 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc2P43407 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sdc2P43407 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc2P43407 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc2P43407 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Sdc2P43407 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc2P43407 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc2P43407 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc2P43407 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sdc2P43407 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc2P43407 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Sdc2P43407 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc2P43407 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc2P43407 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Sdc2P43407 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc2P43407 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc2P43407 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc2P43407 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc2P43407 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc2P43407 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc2P43407 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdc2P43407 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Sdc2P43407 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc2P43407 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.9■□□□□ 0.62
Sdc2P43407 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc2P43407 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc2P43407 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc2P43407 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.9■□□□□ 0.62
Sdc2P43407 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.9■□□□□ 0.62
Sdc2P43407 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc2P43407 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Sdc2P43407 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc2P43407 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.9■□□□□ 0.62
Sdc2P43407 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.9■□□□□ 0.62
Sdc2P43407 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Sdc2P43407 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Sdc2P43407 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc2P43407 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.9■□□□□ 0.62
Sdc2P43407 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc2P43407 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc2P43407 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc2P43407 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc2P43407 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.89■□□□□ 0.62
Sdc2P43407 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sdc2P43407 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
Sdc2P43407 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sdc2P43407 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Sdc2P43407 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.89■□□□□ 0.62
Sdc2P43407 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sdc2P43407 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdc2P43407 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Sdc2P43407 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdc2P43407 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.89■□□□□ 0.61
Sdc2P43407 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sdc2P43407 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdc2P43407 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.89■□□□□ 0.61
Sdc2P43407 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Sdc2P43407 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sdc2P43407 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Sdc2P43407 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdc2P43407 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdc2P43407 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.89■□□□□ 0.61
Sdc2P43407 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdc2P43407 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdc2P43407 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc2P43407 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc2P43407 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc2P43407 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc2P43407 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc2P43407 Gm12085-201ENSMUST00000119263 940 ntBASIC18.88■□□□□ 0.61
Sdc2P43407 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc2P43407 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Sdc2P43407 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc2P43407 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc2P43407 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc2P43407 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc2P43407 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.88■□□□□ 0.61
Sdc2P43407 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc2P43407 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc2P43407 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc2P43407 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc2P43407 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sdc2P43407 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc2P43407 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc2P43407 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc2P43407 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc2P43407 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc2P43407 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc2P43407 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc2P43407 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc2P43407 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc2P43407 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.87■□□□□ 0.61
Sdc2P43407 Gm10653-202ENSMUST00000139570 835 ntBASIC18.87■□□□□ 0.61
Sdc2P43407 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc2P43407 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc2P43407 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc2P43407 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.87■□□□□ 0.61
Sdc2P43407 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms