Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh2P43247 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh2P43247 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh2P43247 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh2P43247 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh2P43247 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Msh2P43247 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh2P43247 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Msh2P43247 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Msh2P43247 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Msh2P43247 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh2P43247 Gm10418-201ENSMUST00000100943 576 ntBASIC17.37■□□□□ 0.37
Msh2P43247 Gm11643-201ENSMUST00000119578 864 ntBASIC17.37■□□□□ 0.37
Msh2P43247 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Msh2P43247 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.37■□□□□ 0.37
Msh2P43247 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.37■□□□□ 0.37
Msh2P43247 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.37■□□□□ 0.37
Msh2P43247 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Msh2P43247 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh2P43247 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh2P43247 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Msh2P43247 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.37■□□□□ 0.37
Msh2P43247 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh2P43247 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh2P43247 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh2P43247 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh2P43247 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh2P43247 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh2P43247 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh2P43247 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh2P43247 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Msh2P43247 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.36■□□□□ 0.37
Msh2P43247 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh2P43247 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.36■□□□□ 0.37
Msh2P43247 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh2P43247 Gm12382-201ENSMUST00000122005 922 ntBASIC17.36■□□□□ 0.37
Msh2P43247 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh2P43247 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.36■□□□□ 0.37
Msh2P43247 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.36■□□□□ 0.37
Msh2P43247 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Msh2P43247 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh2P43247 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh2P43247 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Msh2P43247 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh2P43247 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh2P43247 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh2P43247 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh2P43247 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh2P43247 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Msh2P43247 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Msh2P43247 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh2P43247 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh2P43247 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Msh2P43247 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh2P43247 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Msh2P43247 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh2P43247 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Msh2P43247 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Msh2P43247 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Msh2P43247 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Msh2P43247 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.35■□□□□ 0.37
Msh2P43247 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Msh2P43247 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.35■□□□□ 0.37
Msh2P43247 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.35■□□□□ 0.37
Msh2P43247 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh2P43247 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh2P43247 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
Msh2P43247 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh2P43247 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh2P43247 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh2P43247 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Msh2P43247 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.35■□□□□ 0.37
Msh2P43247 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh2P43247 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh2P43247 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Msh2P43247 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Msh2P43247 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Msh2P43247 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Msh2P43247 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh2P43247 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Msh2P43247 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Msh2P43247 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Msh2P43247 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Msh2P43247 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Msh2P43247 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh2P43247 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Msh2P43247 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh2P43247 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.34■□□□□ 0.37
Msh2P43247 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.34■□□□□ 0.37
Msh2P43247 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh2P43247 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Msh2P43247 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh2P43247 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh2P43247 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh2P43247 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh2P43247 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh2P43247 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh2P43247 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh2P43247 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh2P43247 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms