Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HttP42859 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HttP42859 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HttP42859 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HttP42859 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HttP42859 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HttP42859 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HttP42859 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HttP42859 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HttP42859 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HttP42859 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HttP42859 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HttP42859 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.03■□□□□ 0.48
HttP42859 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HttP42859 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.03■□□□□ 0.48
HttP42859 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.03■□□□□ 0.48
HttP42859 Gm11025-201ENSMUST00000140773 466 ntBASIC18.03■□□□□ 0.48
HttP42859 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.03■□□□□ 0.48
HttP42859 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HttP42859 Gm20949-201ENSMUST00000206478 952 ntBASIC18.03■□□□□ 0.48
HttP42859 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HttP42859 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HttP42859 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HttP42859 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
HttP42859 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HttP42859 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HttP42859 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HttP42859 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HttP42859 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
HttP42859 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HttP42859 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HttP42859 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HttP42859 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HttP42859 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HttP42859 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HttP42859 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HttP42859 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.01■□□□□ 0.47
HttP42859 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.01■□□□□ 0.47
HttP42859 AC140375.2-201ENSMUST00000225283 584 ntBASIC18.01■□□□□ 0.47
HttP42859 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.01■□□□□ 0.47
HttP42859 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HttP42859 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
HttP42859 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
HttP42859 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HttP42859 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HttP42859 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC18.01■□□□□ 0.47
HttP42859 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.01■□□□□ 0.47
HttP42859 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HttP42859 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HttP42859 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HttP42859 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HttP42859 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HttP42859 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HttP42859 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HttP42859 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HttP42859 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18■□□□□ 0.47
HttP42859 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18■□□□□ 0.47
HttP42859 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18■□□□□ 0.47
HttP42859 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18■□□□□ 0.47
HttP42859 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HttP42859 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HttP42859 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HttP42859 Arhgef33-209ENSMUST00000225223 714 ntBASIC18■□□□□ 0.47
HttP42859 Hist1h2al-201ENSMUST00000091708 339 ntBASIC18■□□□□ 0.47
HttP42859 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
HttP42859 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
HttP42859 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.99■□□□□ 0.47
HttP42859 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HttP42859 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
HttP42859 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HttP42859 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HttP42859 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HttP42859 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.99■□□□□ 0.47
HttP42859 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HttP42859 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HttP42859 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HttP42859 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.99■□□□□ 0.47
HttP42859 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HttP42859 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.99■□□□□ 0.47
HttP42859 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.99■□□□□ 0.47
HttP42859 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.99■□□□□ 0.47
HttP42859 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HttP42859 BC021767-201ENSMUST00000126387 1716 ntBASIC17.99■□□□□ 0.47
HttP42859 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HttP42859 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HttP42859 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HttP42859 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
HttP42859 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HttP42859 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HttP42859 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HttP42859 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.98■□□□□ 0.47
HttP42859 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.98■□□□□ 0.47
HttP42859 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HttP42859 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.98■□□□□ 0.47
HttP42859 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HttP42859 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HttP42859 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HttP42859 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HttP42859 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HttP42859 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms