Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Abca1P41233 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Abca1P41233 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Abca1P41233 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Abca1P41233 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Abca1P41233 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Abca1P41233 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Abca1P41233 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Abca1P41233 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.96□□□□□ -0.17
Abca1P41233 Gm27742-201ENSMUST00000184667 60 ntBASIC13.96□□□□□ -0.17
Abca1P41233 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Abca1P41233 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Abca1P41233 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Abca1P41233 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Abca1P41233 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.96□□□□□ -0.17
Abca1P41233 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Abca1P41233 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Abca1P41233 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Abca1P41233 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Abca1P41233 Actl10-202ENSMUST00000226583 1501 ntBASIC13.96□□□□□ -0.17
Abca1P41233 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Abca1P41233 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Abca1P41233 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Abca1P41233 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Abca1P41233 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.95□□□□□ -0.18
Abca1P41233 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Abca1P41233 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Abca1P41233 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.95□□□□□ -0.18
Abca1P41233 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Abca1P41233 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Abca1P41233 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Abca1P41233 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Abca1P41233 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Abca1P41233 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Abca1P41233 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Abca1P41233 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Abca1P41233 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Abca1P41233 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Abca1P41233 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Abca1P41233 Gm43514-201ENSMUST00000198852 424 ntBASIC13.95□□□□□ -0.18
Abca1P41233 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Abca1P41233 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Abca1P41233 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Abca1P41233 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Abca1P41233 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Abca1P41233 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Abca1P41233 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.94□□□□□ -0.18
Abca1P41233 Gm37722-201ENSMUST00000193757 208 ntBASIC13.94□□□□□ -0.18
Abca1P41233 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Abca1P41233 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Abca1P41233 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.94□□□□□ -0.18
Abca1P41233 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.94□□□□□ -0.18
Abca1P41233 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.94□□□□□ -0.18
Abca1P41233 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.94□□□□□ -0.18
Abca1P41233 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.94□□□□□ -0.18
Abca1P41233 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Abca1P41233 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Abca1P41233 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Abca1P41233 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Abca1P41233 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Abca1P41233 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Abca1P41233 Gm45328-201ENSMUST00000210942 917 ntBASIC13.93□□□□□ -0.18
Abca1P41233 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Abca1P41233 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Abca1P41233 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Abca1P41233 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Abca1P41233 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Abca1P41233 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Abca1P41233 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Abca1P41233 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.93□□□□□ -0.18
Abca1P41233 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Abca1P41233 Mir8098-201ENSMUST00000184011 137 ntBASIC13.93□□□□□ -0.18
Abca1P41233 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Abca1P41233 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Abca1P41233 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Abca1P41233 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Abca1P41233 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Abca1P41233 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Abca1P41233 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.92□□□□□ -0.18
Abca1P41233 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.92□□□□□ -0.18
Abca1P41233 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms