Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sox6P40645 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox6P40645 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox6P40645 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox6P40645 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox6P40645 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.85■□□□□ 0.13
Sox6P40645 Gm15378-201ENSMUST00000121894 207 ntBASIC15.85■□□□□ 0.13
Sox6P40645 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sox6P40645 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox6P40645 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox6P40645 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Sox6P40645 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox6P40645 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.85■□□□□ 0.13
Sox6P40645 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox6P40645 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.84■□□□□ 0.13
Sox6P40645 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Sox6P40645 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox6P40645 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox6P40645 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.84■□□□□ 0.13
Sox6P40645 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox6P40645 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox6P40645 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Sox6P40645 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sox6P40645 Gm22240-201ENSMUST00000175225 82 ntBASIC15.84■□□□□ 0.13
Sox6P40645 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox6P40645 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox6P40645 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox6P40645 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Sox6P40645 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Sox6P40645 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Sox6P40645 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox6P40645 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox6P40645 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox6P40645 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Sox6P40645 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sox6P40645 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sox6P40645 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sox6P40645 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sox6P40645 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
Sox6P40645 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sox6P40645 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox6P40645 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox6P40645 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Sox6P40645 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Sox6P40645 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Sox6P40645 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Sox6P40645 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox6P40645 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Sox6P40645 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.83■□□□□ 0.12
Sox6P40645 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sox6P40645 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox6P40645 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox6P40645 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.83■□□□□ 0.12
Sox6P40645 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sox6P40645 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox6P40645 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox6P40645 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox6P40645 Idnk-204ENSMUST00000226010 1898 ntBASIC15.82■□□□□ 0.12
Sox6P40645 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox6P40645 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox6P40645 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox6P40645 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox6P40645 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox6P40645 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sox6P40645 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Sox6P40645 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sox6P40645 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.82■□□□□ 0.12
Sox6P40645 Gm18025-201ENSMUST00000221733 862 ntBASIC15.82■□□□□ 0.12
Sox6P40645 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sox6P40645 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox6P40645 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sox6P40645 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sox6P40645 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.82■□□□□ 0.12
Sox6P40645 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.82■□□□□ 0.12
Sox6P40645 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox6P40645 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.82■□□□□ 0.12
Sox6P40645 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox6P40645 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox6P40645 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox6P40645 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Sox6P40645 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox6P40645 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox6P40645 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Sox6P40645 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox6P40645 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sox6P40645 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox6P40645 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox6P40645 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox6P40645 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.81■□□□□ 0.12
Sox6P40645 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sox6P40645 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.81■□□□□ 0.12
Sox6P40645 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox6P40645 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Sox6P40645 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox6P40645 Gm29791-202ENSMUST00000207888 369 ntBASIC15.81■□□□□ 0.12
Sox6P40645 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sox6P40645 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sox6P40645 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.81■□□□□ 0.12
Sox6P40645 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Sox6P40645 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms