Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdkn1aP39689 Rarb-207ENSMUST00000225921 2756 ntBASIC13.92□□□□□ -0.18
Cdkn1aP39689 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdkn1aP39689 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Cdkn1aP39689 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdkn1aP39689 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdkn1aP39689 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdkn1aP39689 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.92□□□□□ -0.18
Cdkn1aP39689 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.92□□□□□ -0.18
Cdkn1aP39689 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdkn1aP39689 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.92□□□□□ -0.18
Cdkn1aP39689 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdkn1aP39689 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdkn1aP39689 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdkn1aP39689 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.92□□□□□ -0.18
Cdkn1aP39689 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cdkn1aP39689 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdkn1aP39689 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdkn1aP39689 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdkn1aP39689 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdkn1aP39689 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdkn1aP39689 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdkn1aP39689 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cdkn1aP39689 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.91□□□□□ -0.18
Cdkn1aP39689 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdkn1aP39689 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.91□□□□□ -0.18
Cdkn1aP39689 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Mir770-201ENSMUST00000103252 94 ntBASIC13.9□□□□□ -0.18
Cdkn1aP39689 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.9□□□□□ -0.18
Cdkn1aP39689 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Gm6623-201ENSMUST00000173570 544 ntBASIC13.9□□□□□ -0.18
Cdkn1aP39689 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.9□□□□□ -0.18
Cdkn1aP39689 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdkn1aP39689 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cdkn1aP39689 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.9□□□□□ -0.19
Cdkn1aP39689 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cdkn1aP39689 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cdkn1aP39689 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn1aP39689 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn1aP39689 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn1aP39689 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn1aP39689 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn1aP39689 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Cdkn1aP39689 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cdkn1aP39689 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkn1aP39689 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms