Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.79□□□□□ -0.04
Upk2P38575 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.79□□□□□ -0.04
Upk2P38575 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk2P38575 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk2P38575 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Upk2P38575 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Upk2P38575 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk2P38575 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk2P38575 Gm5417-201ENSMUST00000079706 384 ntBASIC14.79□□□□□ -0.04
Upk2P38575 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Upk2P38575 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Upk2P38575 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Upk2P38575 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk2P38575 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Upk2P38575 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk2P38575 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.78□□□□□ -0.04
Upk2P38575 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk2P38575 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.78□□□□□ -0.04
Upk2P38575 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upk2P38575 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk2P38575 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.78□□□□□ -0.04
Upk2P38575 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk2P38575 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.78□□□□□ -0.04
Upk2P38575 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.78□□□□□ -0.04
Upk2P38575 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Upk2P38575 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk2P38575 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk2P38575 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Upk2P38575 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upk2P38575 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.78□□□□□ -0.04
Upk2P38575 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.78□□□□□ -0.04
Upk2P38575 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upk2P38575 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk2P38575 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Upk2P38575 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk2P38575 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk2P38575 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.78□□□□□ -0.04
Upk2P38575 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Upk2P38575 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk2P38575 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk2P38575 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk2P38575 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk2P38575 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upk2P38575 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Upk2P38575 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Upk2P38575 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.77□□□□□ -0.04
Upk2P38575 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upk2P38575 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upk2P38575 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upk2P38575 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upk2P38575 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upk2P38575 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upk2P38575 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upk2P38575 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Upk2P38575 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upk2P38575 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Upk2P38575 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Upk2P38575 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upk2P38575 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.77□□□□□ -0.05
Upk2P38575 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Upk2P38575 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upk2P38575 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upk2P38575 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upk2P38575 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Upk2P38575 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upk2P38575 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Upk2P38575 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk2P38575 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk2P38575 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk2P38575 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Upk2P38575 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk2P38575 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk2P38575 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Upk2P38575 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk2P38575 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk2P38575 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Upk2P38575 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.76□□□□□ -0.05
Upk2P38575 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.76□□□□□ -0.05
Upk2P38575 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Upk2P38575 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Upk2P38575 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk2P38575 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk2P38575 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk2P38575 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk2P38575 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.76□□□□□ -0.05
Upk2P38575 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk2P38575 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upk2P38575 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Upk2P38575 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Upk2P38575 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upk2P38575 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upk2P38575 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upk2P38575 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upk2P38575 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Upk2P38575 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Upk2P38575 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upk2P38575 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Upk2P38575 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.75□□□□□ -0.05
Upk2P38575 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upk2P38575 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms