Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LdlrP35951 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LdlrP35951 Gm10138-203ENSMUST00000206952 366 ntBASIC16.79■□□□□ 0.28
LdlrP35951 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.79■□□□□ 0.28
LdlrP35951 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LdlrP35951 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LdlrP35951 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LdlrP35951 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LdlrP35951 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LdlrP35951 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LdlrP35951 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LdlrP35951 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LdlrP35951 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LdlrP35951 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LdlrP35951 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LdlrP35951 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.78■□□□□ 0.28
LdlrP35951 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.78■□□□□ 0.28
LdlrP35951 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LdlrP35951 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LdlrP35951 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LdlrP35951 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LdlrP35951 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LdlrP35951 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.78■□□□□ 0.28
LdlrP35951 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LdlrP35951 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LdlrP35951 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LdlrP35951 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LdlrP35951 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LdlrP35951 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LdlrP35951 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LdlrP35951 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LdlrP35951 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.77■□□□□ 0.28
LdlrP35951 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LdlrP35951 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LdlrP35951 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LdlrP35951 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LdlrP35951 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LdlrP35951 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LdlrP35951 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LdlrP35951 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LdlrP35951 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LdlrP35951 Gm6433-201ENSMUST00000118634 875 ntBASIC16.77■□□□□ 0.28
LdlrP35951 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.77■□□□□ 0.28
LdlrP35951 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LdlrP35951 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.77■□□□□ 0.28
LdlrP35951 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.77■□□□□ 0.28
LdlrP35951 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LdlrP35951 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LdlrP35951 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LdlrP35951 Dancr-204ENSMUST00000132389 2347 ntBASIC16.77■□□□□ 0.28
LdlrP35951 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LdlrP35951 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LdlrP35951 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
LdlrP35951 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
LdlrP35951 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LdlrP35951 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.77■□□□□ 0.27
LdlrP35951 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LdlrP35951 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LdlrP35951 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
LdlrP35951 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
LdlrP35951 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LdlrP35951 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LdlrP35951 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LdlrP35951 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LdlrP35951 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LdlrP35951 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LdlrP35951 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LdlrP35951 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LdlrP35951 Gm15375-201ENSMUST00000119510 849 ntBASIC16.76■□□□□ 0.27
LdlrP35951 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.76■□□□□ 0.27
LdlrP35951 Gm10231-201ENSMUST00000181584 441 ntBASIC16.76■□□□□ 0.27
LdlrP35951 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LdlrP35951 Gm10175-202ENSMUST00000208752 441 ntBASIC16.76■□□□□ 0.27
LdlrP35951 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LdlrP35951 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LdlrP35951 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LdlrP35951 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.76■□□□□ 0.27
LdlrP35951 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LdlrP35951 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LdlrP35951 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LdlrP35951 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LdlrP35951 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LdlrP35951 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LdlrP35951 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.75■□□□□ 0.27
LdlrP35951 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LdlrP35951 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LdlrP35951 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LdlrP35951 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LdlrP35951 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LdlrP35951 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LdlrP35951 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LdlrP35951 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LdlrP35951 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LdlrP35951 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LdlrP35951 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LdlrP35951 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LdlrP35951 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LdlrP35951 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LdlrP35951 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LdlrP35951 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms