Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Thbs1P35441 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.57■□□□□ 0.08
Thbs1P35441 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Thbs1P35441 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Thbs1P35441 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.57■□□□□ 0.08
Thbs1P35441 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Thbs1P35441 Gm18958-201ENSMUST00000174258 762 ntBASIC15.57■□□□□ 0.08
Thbs1P35441 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.57■□□□□ 0.08
Thbs1P35441 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Thbs1P35441 Gm3375-201ENSMUST00000203929 796 ntBASIC15.57■□□□□ 0.08
Thbs1P35441 Gm7791-201ENSMUST00000219066 539 ntBASIC15.57■□□□□ 0.08
Thbs1P35441 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Thbs1P35441 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Thbs1P35441 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Thbs1P35441 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.57■□□□□ 0.08
Thbs1P35441 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Thbs1P35441 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Thbs1P35441 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Thbs1P35441 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
Thbs1P35441 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Thbs1P35441 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Thbs1P35441 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Thbs1P35441 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.56■□□□□ 0.08
Thbs1P35441 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Thbs1P35441 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Thbs1P35441 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Thbs1P35441 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Thbs1P35441 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.56■□□□□ 0.08
Thbs1P35441 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.56■□□□□ 0.08
Thbs1P35441 Gm21814-202ENSMUST00000203277 873 ntBASIC15.56■□□□□ 0.08
Thbs1P35441 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.56■□□□□ 0.08
Thbs1P35441 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Thbs1P35441 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Thbs1P35441 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Thbs1P35441 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Thbs1P35441 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Thbs1P35441 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Thbs1P35441 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Thbs1P35441 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Thbs1P35441 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Thbs1P35441 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Thbs1P35441 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Thbs1P35441 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Thbs1P35441 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Thbs1P35441 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Thbs1P35441 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.55■□□□□ 0.08
Thbs1P35441 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Thbs1P35441 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.55■□□□□ 0.08
Thbs1P35441 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.55■□□□□ 0.08
Thbs1P35441 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Thbs1P35441 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Thbs1P35441 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Thbs1P35441 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Thbs1P35441 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Thbs1P35441 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Thbs1P35441 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Thbs1P35441 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Thbs1P35441 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Thbs1P35441 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Thbs1P35441 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Thbs1P35441 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Thbs1P35441 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Thbs1P35441 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Thbs1P35441 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Thbs1P35441 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Thbs1P35441 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Thbs1P35441 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Thbs1P35441 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Thbs1P35441 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Thbs1P35441 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Thbs1P35441 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Thbs1P35441 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Thbs1P35441 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.54■□□□□ 0.08
Thbs1P35441 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.54■□□□□ 0.08
Thbs1P35441 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.54■□□□□ 0.08
Thbs1P35441 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.54■□□□□ 0.08
Thbs1P35441 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Thbs1P35441 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Thbs1P35441 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Thbs1P35441 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Thbs1P35441 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Thbs1P35441 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.54■□□□□ 0.08
Thbs1P35441 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Thbs1P35441 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Thbs1P35441 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Thbs1P35441 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Thbs1P35441 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Gm13836-201ENSMUST00000121159 501 ntBASIC15.53■□□□□ 0.08
Thbs1P35441 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 104.2 ms