Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nckap1P28660 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.78■□□□□ 0.28
Nckap1P28660 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nckap1P28660 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nckap1P28660 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.78■□□□□ 0.28
Nckap1P28660 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nckap1P28660 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nckap1P28660 Mir3081-201ENSMUST00000175305 84 ntBASIC16.78■□□□□ 0.28
Nckap1P28660 Gm27000-201ENSMUST00000182943 842 ntBASIC16.78■□□□□ 0.28
Nckap1P28660 Gm27742-201ENSMUST00000184667 60 ntBASIC16.78■□□□□ 0.28
Nckap1P28660 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.78■□□□□ 0.28
Nckap1P28660 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nckap1P28660 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nckap1P28660 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nckap1P28660 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nckap1P28660 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nckap1P28660 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nckap1P28660 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nckap1P28660 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nckap1P28660 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nckap1P28660 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nckap1P28660 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nckap1P28660 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nckap1P28660 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nckap1P28660 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nckap1P28660 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.77■□□□□ 0.28
Nckap1P28660 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.77■□□□□ 0.28
Nckap1P28660 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nckap1P28660 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Nckap1P28660 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nckap1P28660 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nckap1P28660 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nckap1P28660 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nckap1P28660 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nckap1P28660 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nckap1P28660 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nckap1P28660 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Nckap1P28660 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nckap1P28660 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nckap1P28660 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nckap1P28660 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nckap1P28660 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nckap1P28660 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Nckap1P28660 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Nckap1P28660 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nckap1P28660 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nckap1P28660 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nckap1P28660 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nckap1P28660 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.76■□□□□ 0.27
Nckap1P28660 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nckap1P28660 Gm11336-201ENSMUST00000118168 334 ntBASIC16.76■□□□□ 0.27
Nckap1P28660 Gm28033-201ENSMUST00000184224 96 ntBASIC16.76■□□□□ 0.27
Nckap1P28660 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.76■□□□□ 0.27
Nckap1P28660 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nckap1P28660 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.76■□□□□ 0.27
Nckap1P28660 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nckap1P28660 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nckap1P28660 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.76■□□□□ 0.27
Nckap1P28660 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Nckap1P28660 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nckap1P28660 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nckap1P28660 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.75■□□□□ 0.27
Nckap1P28660 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Gm17971-201ENSMUST00000190239 806 ntBASIC16.75■□□□□ 0.27
Nckap1P28660 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nckap1P28660 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Nckap1P28660 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Nckap1P28660 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nckap1P28660 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nckap1P28660 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nckap1P28660 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nckap1P28660 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nckap1P28660 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nckap1P28660 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nckap1P28660 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nckap1P28660 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nckap1P28660 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nckap1P28660 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms