Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nfkb1P25799 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nfkb1P25799 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nfkb1P25799 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Nfkb1P25799 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nfkb1P25799 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nfkb1P25799 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nfkb1P25799 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nfkb1P25799 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nfkb1P25799 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Nfkb1P25799 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nfkb1P25799 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nfkb1P25799 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Nfkb1P25799 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nfkb1P25799 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nfkb1P25799 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.31■□□□□ 0.36
Nfkb1P25799 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nfkb1P25799 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Nfkb1P25799 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Nfkb1P25799 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nfkb1P25799 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nfkb1P25799 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.31■□□□□ 0.36
Nfkb1P25799 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nfkb1P25799 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nfkb1P25799 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.31■□□□□ 0.36
Nfkb1P25799 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nfkb1P25799 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nfkb1P25799 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.31■□□□□ 0.36
Nfkb1P25799 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nfkb1P25799 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Nfkb1P25799 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nfkb1P25799 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.3■□□□□ 0.36
Nfkb1P25799 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nfkb1P25799 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nfkb1P25799 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nfkb1P25799 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Nfkb1P25799 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nfkb1P25799 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nfkb1P25799 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nfkb1P25799 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nfkb1P25799 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.3■□□□□ 0.36
Nfkb1P25799 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nfkb1P25799 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nfkb1P25799 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nfkb1P25799 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.3■□□□□ 0.36
Nfkb1P25799 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nfkb1P25799 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nfkb1P25799 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nfkb1P25799 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nfkb1P25799 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nfkb1P25799 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nfkb1P25799 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nfkb1P25799 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nfkb1P25799 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nfkb1P25799 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.29■□□□□ 0.36
Nfkb1P25799 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nfkb1P25799 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nfkb1P25799 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nfkb1P25799 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nfkb1P25799 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nfkb1P25799 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nfkb1P25799 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Nfkb1P25799 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nfkb1P25799 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Nfkb1P25799 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.28■□□□□ 0.36
Nfkb1P25799 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Nfkb1P25799 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Nfkb1P25799 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nfkb1P25799 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nfkb1P25799 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nfkb1P25799 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nfkb1P25799 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.28■□□□□ 0.36
Nfkb1P25799 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nfkb1P25799 Gm17807-201ENSMUST00000186869 298 ntBASIC17.28■□□□□ 0.36
Nfkb1P25799 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.28■□□□□ 0.36
Nfkb1P25799 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nfkb1P25799 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nfkb1P25799 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nfkb1P25799 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nfkb1P25799 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nfkb1P25799 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nfkb1P25799 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nfkb1P25799 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nfkb1P25799 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nfkb1P25799 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nfkb1P25799 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nfkb1P25799 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Nfkb1P25799 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nfkb1P25799 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nfkb1P25799 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nfkb1P25799 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nfkb1P25799 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.27■□□□□ 0.36
Nfkb1P25799 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.27■□□□□ 0.36
Nfkb1P25799 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nfkb1P25799 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nfkb1P25799 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nfkb1P25799 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nfkb1P25799 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Nfkb1P25799 Gm27741-201ENSMUST00000185060 237 ntBASIC17.27■□□□□ 0.36
Nfkb1P25799 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms