Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rb1P13405 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rb1P13405 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Rb1P13405 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rb1P13405 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rb1P13405 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rb1P13405 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Rb1P13405 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rb1P13405 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.22■□□□□ 0.35
Rb1P13405 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rb1P13405 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.22■□□□□ 0.35
Rb1P13405 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rb1P13405 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rb1P13405 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rb1P13405 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rb1P13405 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rb1P13405 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rb1P13405 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rb1P13405 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rb1P13405 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.21■□□□□ 0.35
Rb1P13405 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rb1P13405 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rb1P13405 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rb1P13405 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rb1P13405 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rb1P13405 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rb1P13405 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.21■□□□□ 0.35
Rb1P13405 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rb1P13405 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rb1P13405 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rb1P13405 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rb1P13405 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rb1P13405 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rb1P13405 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rb1P13405 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rb1P13405 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Rb1P13405 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.2■□□□□ 0.34
Rb1P13405 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rb1P13405 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.2■□□□□ 0.34
Rb1P13405 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rb1P13405 Gm17661-201ENSMUST00000170317 270 ntBASIC17.2■□□□□ 0.34
Rb1P13405 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rb1P13405 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rb1P13405 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rb1P13405 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rb1P13405 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rb1P13405 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rb1P13405 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.2■□□□□ 0.34
Rb1P13405 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rb1P13405 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rb1P13405 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rb1P13405 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rb1P13405 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rb1P13405 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rb1P13405 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rb1P13405 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rb1P13405 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rb1P13405 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rb1P13405 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.19■□□□□ 0.34
Rb1P13405 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.19■□□□□ 0.34
Rb1P13405 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rb1P13405 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.19■□□□□ 0.34
Rb1P13405 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.19■□□□□ 0.34
Rb1P13405 Gm27389-201ENSMUST00000183622 195 ntBASIC17.19■□□□□ 0.34
Rb1P13405 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.19■□□□□ 0.34
Rb1P13405 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rb1P13405 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rb1P13405 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rb1P13405 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rb1P13405 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.19■□□□□ 0.34
Rb1P13405 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rb1P13405 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rb1P13405 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rb1P13405 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rb1P13405 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rb1P13405 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rb1P13405 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rb1P13405 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rb1P13405 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rb1P13405 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rb1P13405 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.18■□□□□ 0.34
Rb1P13405 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rb1P13405 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rb1P13405 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rb1P13405 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rb1P13405 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rb1P13405 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rb1P13405 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rb1P13405 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.18■□□□□ 0.34
Rb1P13405 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rb1P13405 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rb1P13405 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rb1P13405 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rb1P13405 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.17■□□□□ 0.34
Rb1P13405 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rb1P13405 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rb1P13405 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rb1P13405 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rb1P13405 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.17■□□□□ 0.34
Rb1P13405 Gm9013-201ENSMUST00000132939 882 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms