Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smim1P0C8K7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smim1P0C8K7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Smim1P0C8K7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Smim1P0C8K7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.68□□□□□ -0.54
Smim1P0C8K7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smim1P0C8K7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Smim1P0C8K7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smim1P0C8K7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Gm38205-201ENSMUST00000192243 258 ntBASIC11.67□□□□□ -0.54
Smim1P0C8K7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC11.67□□□□□ -0.54
Smim1P0C8K7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smim1P0C8K7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Spcs1-204ENSMUST00000226782 949 ntBASIC11.66□□□□□ -0.54
Smim1P0C8K7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Gm5921-201ENSMUST00000075898 882 ntBASIC11.66□□□□□ -0.54
Smim1P0C8K7 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smim1P0C8K7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.65□□□□□ -0.54
Smim1P0C8K7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smim1P0C8K7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smim1P0C8K7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smim1P0C8K7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Smim1P0C8K7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Smim1P0C8K7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smim1P0C8K7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms