Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC21.86■■□□□ 1.09
Hoxc9P09633 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Hoxc9P09633 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hoxc9P09633 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Hoxc9P09633 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hoxc9P09633 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hoxc9P09633 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.85■■□□□ 1.09
Hoxc9P09633 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC21.85■■□□□ 1.09
Hoxc9P09633 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hoxc9P09633 Gm1818-201ENSMUST00000169406 1184 ntBASIC21.85■■□□□ 1.09
Hoxc9P09633 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC21.85■■□□□ 1.09
Hoxc9P09633 Gm44357-201ENSMUST00000195897 142 ntBASIC21.85■■□□□ 1.09
Hoxc9P09633 Gm19658-201ENSMUST00000196231 138 ntBASIC21.85■■□□□ 1.09
Hoxc9P09633 Gm44367-201ENSMUST00000196836 138 ntBASIC21.85■■□□□ 1.09
Hoxc9P09633 Gm44350-201ENSMUST00000197197 138 ntBASIC21.85■■□□□ 1.09
Hoxc9P09633 Gm44390-201ENSMUST00000197533 144 ntBASIC21.85■■□□□ 1.09
Hoxc9P09633 Gm44313-201ENSMUST00000198018 138 ntBASIC21.85■■□□□ 1.09
Hoxc9P09633 Gm44486-201ENSMUST00000198508 138 ntBASIC21.85■■□□□ 1.09
Hoxc9P09633 Gm44454-201ENSMUST00000198541 138 ntBASIC21.85■■□□□ 1.09
Hoxc9P09633 Gm44314-201ENSMUST00000199263 138 ntBASIC21.85■■□□□ 1.09
Hoxc9P09633 Gm44394-201ENSMUST00000199558 138 ntBASIC21.85■■□□□ 1.09
Hoxc9P09633 Gm44484-201ENSMUST00000199873 138 ntBASIC21.85■■□□□ 1.09
Hoxc9P09633 Gm44466-201ENSMUST00000200264 138 ntBASIC21.85■■□□□ 1.09
Hoxc9P09633 Gm44359-201ENSMUST00000200671 138 ntBASIC21.85■■□□□ 1.09
Hoxc9P09633 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC21.85■■□□□ 1.09
Hoxc9P09633 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC21.85■■□□□ 1.09
Hoxc9P09633 AC161829.1-201ENSMUST00000220298 281 ntBASIC21.85■■□□□ 1.09
Hoxc9P09633 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC21.85■■□□□ 1.09
Hoxc9P09633 Gm6296-201ENSMUST00000222599 943 ntBASIC21.85■■□□□ 1.09
Hoxc9P09633 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Hoxc9P09633 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hoxc9P09633 Gm15442-201ENSMUST00000117905 1527 ntBASIC21.85■■□□□ 1.09
Hoxc9P09633 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hoxc9P09633 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hoxc9P09633 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC21.84■■□□□ 1.09
Hoxc9P09633 Gm18195-201ENSMUST00000207604 706 ntBASIC21.84■■□□□ 1.09
Hoxc9P09633 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC21.84■■□□□ 1.09
Hoxc9P09633 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
Hoxc9P09633 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hoxc9P09633 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Hoxc9P09633 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hoxc9P09633 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hoxc9P09633 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hoxc9P09633 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hoxc9P09633 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hoxc9P09633 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hoxc9P09633 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hoxc9P09633 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Hoxc9P09633 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Hoxc9P09633 Gm9449-201ENSMUST00000207265 1011 ntBASIC21.83■■□□□ 1.09
Hoxc9P09633 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hoxc9P09633 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hoxc9P09633 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Hoxc9P09633 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hoxc9P09633 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Hoxc9P09633 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Hoxc9P09633 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.83■■□□□ 1.08
Hoxc9P09633 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC21.83■■□□□ 1.08
Hoxc9P09633 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hoxc9P09633 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC21.82■■□□□ 1.08
Hoxc9P09633 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
Hoxc9P09633 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hoxc9P09633 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC21.82■■□□□ 1.08
Hoxc9P09633 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC21.82■■□□□ 1.08
Hoxc9P09633 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hoxc9P09633 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Hoxc9P09633 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC21.82■■□□□ 1.08
Hoxc9P09633 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hoxc9P09633 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Hoxc9P09633 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hoxc9P09633 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Hoxc9P09633 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Hoxc9P09633 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Hoxc9P09633 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Hoxc9P09633 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hoxc9P09633 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.81■■□□□ 1.08
Hoxc9P09633 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hoxc9P09633 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.8■■□□□ 1.08
Hoxc9P09633 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.8■■□□□ 1.08
Hoxc9P09633 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hoxc9P09633 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Hoxc9P09633 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hoxc9P09633 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC21.8■■□□□ 1.08
Hoxc9P09633 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC21.8■■□□□ 1.08
Hoxc9P09633 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hoxc9P09633 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC21.8■■□□□ 1.08
Hoxc9P09633 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hoxc9P09633 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hoxc9P09633 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hoxc9P09633 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.79■■□□□ 1.08
Hoxc9P09633 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxc9P09633 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxc9P09633 Gm7862-201ENSMUST00000121461 292 ntBASIC21.79■■□□□ 1.08
Hoxc9P09633 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC21.79■■□□□ 1.08
Hoxc9P09633 Gm27525-201ENSMUST00000184465 107 ntBASIC21.79■■□□□ 1.08
Hoxc9P09633 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC21.79■■□□□ 1.08
Hoxc9P09633 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxc9P09633 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxc9P09633 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxc9P09633 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms