Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
P06328 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.36□□□□□ -0.43
P06328 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.36□□□□□ -0.43
P06328 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
P06328 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
P06328 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.36□□□□□ -0.43
P06328 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.36□□□□□ -0.43
P06328 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.36□□□□□ -0.43
P06328 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
P06328 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P06328 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06328 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06328 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06328 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06328 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
P06328 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P06328 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06328 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.35□□□□□ -0.43
P06328 Gm12441-201ENSMUST00000121806 588 ntBASIC12.35□□□□□ -0.43
P06328 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P06328 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.35□□□□□ -0.43
P06328 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P06328 Gm43183-201ENSMUST00000200632 547 ntBASIC12.35□□□□□ -0.43
P06328 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06328 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06328 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06328 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
P06328 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
P06328 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06328 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06328 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
P06328 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06328 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06328 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06328 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P06328 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
P06328 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06328 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
P06328 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
P06328 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.34□□□□□ -0.43
P06328 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
P06328 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
P06328 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P06328 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
P06328 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
P06328 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
P06328 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
P06328 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
P06328 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P06328 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P06328 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
P06328 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P06328 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P06328 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P06328 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P06328 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.33□□□□□ -0.44
P06328 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
P06328 Trmt13-210ENSMUST00000198454 880 ntBASIC12.33□□□□□ -0.44
P06328 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P06328 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P06328 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P06328 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
P06328 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P06328 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.33□□□□□ -0.44
P06328 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P06328 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P06328 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P06328 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms