Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
P04946 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
P04946 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
P04946 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
P04946 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
P04946 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
P04946 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
P04946 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
P04946 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
P04946 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
P04946 Rarb-207ENSMUST00000225921 2756 ntBASIC14.47□□□□□ -0.09
P04946 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
P04946 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
P04946 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
P04946 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
P04946 Gm9103-201ENSMUST00000119371 405 ntBASIC14.47□□□□□ -0.09
P04946 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
P04946 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.47□□□□□ -0.09
P04946 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.47□□□□□ -0.09
P04946 Gm18421-201ENSMUST00000204122 625 ntBASIC14.47□□□□□ -0.09
P04946 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
P04946 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
P04946 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
P04946 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
P04946 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
P04946 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
P04946 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
P04946 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
P04946 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
P04946 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
P04946 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P04946 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P04946 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.46□□□□□ -0.09
P04946 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P04946 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
P04946 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.46□□□□□ -0.09
P04946 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P04946 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.46□□□□□ -0.09
P04946 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.46□□□□□ -0.09
P04946 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
P04946 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
P04946 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
P04946 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.46□□□□□ -0.09
P04946 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
P04946 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.46□□□□□ -0.09
P04946 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.46□□□□□ -0.09
P04946 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P04946 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
P04946 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
P04946 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
P04946 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
P04946 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P04946 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
P04946 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
P04946 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
P04946 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P04946 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
P04946 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
P04946 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
P04946 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.45□□□□□ -0.1
P04946 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.45□□□□□ -0.1
P04946 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.45□□□□□ -0.1
P04946 Gm17807-201ENSMUST00000186869 298 ntBASIC14.45□□□□□ -0.1
P04946 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.45□□□□□ -0.1
P04946 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P04946 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P04946 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P04946 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
P04946 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P04946 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
P04946 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.44□□□□□ -0.1
P04946 Gm27357-201ENSMUST00000183754 135 ntBASIC14.44□□□□□ -0.1
P04946 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.44□□□□□ -0.1
P04946 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
P04946 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
P04946 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P04946 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P04946 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P04946 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P04946 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P04946 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms