Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Gm10566-201ENSMUST00000086739 996 ntBASIC15.27■□□□□ 0.04
P01808 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01808 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
P01808 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01808 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
P01808 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01808 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01808 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01808 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01808 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
P01808 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01808 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01808 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01808 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
P01808 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.26■□□□□ 0.03
P01808 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
P01808 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
P01808 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
P01808 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.26■□□□□ 0.03
P01808 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
P01808 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
P01808 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
P01808 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
P01808 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01808 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01808 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01808 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01808 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P01808 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01808 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01808 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P01808 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01808 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P01808 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01808 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01808 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01808 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P01808 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P01808 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01808 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.25■□□□□ 0.03
P01808 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.25■□□□□ 0.03
P01808 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.25■□□□□ 0.03
P01808 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
P01808 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
P01808 Actl10-202ENSMUST00000226583 1501 ntBASIC15.25■□□□□ 0.03
P01808 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
P01808 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P01808 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P01808 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01808 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01808 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
P01808 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01808 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01808 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.24■□□□□ 0.03
P01808 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
P01808 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01808 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P01808 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01808 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
P01808 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01808 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.24■□□□□ 0.03
P01808 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01808 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.24■□□□□ 0.03
P01808 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
P01808 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01808 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P01808 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01808 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.23■□□□□ 0.03
P01808 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01808 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01808 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.23■□□□□ 0.03
P01808 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
P01808 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P01808 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01808 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.23■□□□□ 0.03
P01808 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P01808 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.23■□□□□ 0.03
P01808 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.23■□□□□ 0.03
P01808 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms