Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igh-VJ558P01758 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igh-VJ558P01758 Gm5417-201ENSMUST00000079706 384 ntBASIC14.59□□□□□ -0.07
Igh-VJ558P01758 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igh-VJ558P01758 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Igh-VJ558P01758 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Igh-VJ558P01758 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Igh-VJ558P01758 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igh-VJ558P01758 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igh-VJ558P01758 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Igh-VJ558P01758 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igh-VJ558P01758 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igh-VJ558P01758 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igh-VJ558P01758 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igh-VJ558P01758 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igh-VJ558P01758 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Igh-VJ558P01758 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.58□□□□□ -0.07
Igh-VJ558P01758 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Igh-VJ558P01758 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Igh-VJ558P01758 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Igh-VJ558P01758 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igh-VJ558P01758 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Igh-VJ558P01758 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Igh-VJ558P01758 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igh-VJ558P01758 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Igh-VJ558P01758 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igh-VJ558P01758 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Igh-VJ558P01758 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igh-VJ558P01758 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Igh-VJ558P01758 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.58□□□□□ -0.08
Igh-VJ558P01758 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igh-VJ558P01758 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igh-VJ558P01758 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.58□□□□□ -0.08
Igh-VJ558P01758 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igh-VJ558P01758 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igh-VJ558P01758 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.58□□□□□ -0.08
Igh-VJ558P01758 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igh-VJ558P01758 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Igh-VJ558P01758 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igh-VJ558P01758 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.56□□□□□ -0.08
Igh-VJ558P01758 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Igh-VJ558P01758 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igh-VJ558P01758 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Igh-VJ558P01758 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igh-VJ558P01758 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Igh-VJ558P01758 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Igh-VJ558P01758 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igh-VJ558P01758 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Igh-VJ558P01758 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Igh-VJ558P01758 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igh-VJ558P01758 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Igh-VJ558P01758 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Igh-VJ558P01758 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.55□□□□□ -0.08
Igh-VJ558P01758 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms