Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Syn1O88935 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Syn1O88935 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Syn1O88935 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Syn1O88935 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syn1O88935 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.33■□□□□ 0.36
Syn1O88935 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.33■□□□□ 0.36
Syn1O88935 Gm4995-201ENSMUST00000117247 432 ntBASIC17.33■□□□□ 0.36
Syn1O88935 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.33■□□□□ 0.36
Syn1O88935 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Syn1O88935 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.33■□□□□ 0.36
Syn1O88935 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.33■□□□□ 0.36
Syn1O88935 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syn1O88935 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syn1O88935 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Syn1O88935 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Syn1O88935 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.33■□□□□ 0.36
Syn1O88935 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syn1O88935 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syn1O88935 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.33■□□□□ 0.36
Syn1O88935 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syn1O88935 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Syn1O88935 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syn1O88935 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syn1O88935 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Syn1O88935 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syn1O88935 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Syn1O88935 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Syn1O88935 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.32■□□□□ 0.36
Syn1O88935 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syn1O88935 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syn1O88935 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syn1O88935 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Syn1O88935 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.32■□□□□ 0.36
Syn1O88935 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.32■□□□□ 0.36
Syn1O88935 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.32■□□□□ 0.36
Syn1O88935 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Syn1O88935 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.32■□□□□ 0.36
Syn1O88935 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
Syn1O88935 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.32■□□□□ 0.36
Syn1O88935 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syn1O88935 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syn1O88935 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syn1O88935 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syn1O88935 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.32■□□□□ 0.36
Syn1O88935 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syn1O88935 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syn1O88935 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Syn1O88935 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Syn1O88935 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syn1O88935 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.32■□□□□ 0.36
Syn1O88935 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syn1O88935 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syn1O88935 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Syn1O88935 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Syn1O88935 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Syn1O88935 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.31■□□□□ 0.36
Syn1O88935 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syn1O88935 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.31■□□□□ 0.36
Syn1O88935 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syn1O88935 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syn1O88935 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syn1O88935 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syn1O88935 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Syn1O88935 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syn1O88935 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syn1O88935 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syn1O88935 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syn1O88935 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syn1O88935 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syn1O88935 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Syn1O88935 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.3■□□□□ 0.36
Syn1O88935 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Syn1O88935 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Syn1O88935 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syn1O88935 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Syn1O88935 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Syn1O88935 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syn1O88935 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syn1O88935 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Syn1O88935 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Syn1O88935 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syn1O88935 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syn1O88935 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syn1O88935 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syn1O88935 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syn1O88935 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Syn1O88935 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syn1O88935 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.29■□□□□ 0.36
Syn1O88935 Idnk-204ENSMUST00000226010 1898 ntBASIC17.29■□□□□ 0.36
Syn1O88935 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syn1O88935 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Syn1O88935 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syn1O88935 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syn1O88935 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Syn1O88935 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syn1O88935 Gm15165-201ENSMUST00000118140 502 ntBASIC17.29■□□□□ 0.36
Syn1O88935 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.29■□□□□ 0.36
Syn1O88935 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.29■□□□□ 0.36
Syn1O88935 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms