Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn1O88704 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcn1O88704 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Hcn1O88704 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn1O88704 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn1O88704 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn1O88704 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn1O88704 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn1O88704 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.15■□□□□ 0.18
Hcn1O88704 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn1O88704 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn1O88704 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn1O88704 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn1O88704 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Hcn1O88704 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Hcn1O88704 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Hcn1O88704 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.15■□□□□ 0.18
Hcn1O88704 Gm4974-201ENSMUST00000209974 875 ntBASIC16.15■□□□□ 0.18
Hcn1O88704 Odf3b-204ENSMUST00000227834 930 ntBASIC16.15■□□□□ 0.18
Hcn1O88704 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn1O88704 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn1O88704 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.15■□□□□ 0.18
Hcn1O88704 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn1O88704 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Hcn1O88704 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn1O88704 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn1O88704 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.15■□□□□ 0.18
Hcn1O88704 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn1O88704 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn1O88704 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hcn1O88704 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Hcn1O88704 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Hcn1O88704 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn1O88704 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.14■□□□□ 0.17
Hcn1O88704 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn1O88704 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn1O88704 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.14■□□□□ 0.17
Hcn1O88704 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.14■□□□□ 0.17
Hcn1O88704 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn1O88704 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn1O88704 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Hcn1O88704 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.14■□□□□ 0.17
Hcn1O88704 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn1O88704 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn1O88704 Gm5417-201ENSMUST00000079706 384 ntBASIC16.14■□□□□ 0.17
Hcn1O88704 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Hcn1O88704 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn1O88704 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn1O88704 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn1O88704 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn1O88704 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn1O88704 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn1O88704 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hcn1O88704 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn1O88704 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.13■□□□□ 0.17
Hcn1O88704 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn1O88704 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Hcn1O88704 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn1O88704 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.13■□□□□ 0.17
Hcn1O88704 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.13■□□□□ 0.17
Hcn1O88704 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.13■□□□□ 0.17
Hcn1O88704 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn1O88704 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn1O88704 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Hcn1O88704 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.13■□□□□ 0.17
Hcn1O88704 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn1O88704 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Hcn1O88704 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Hcn1O88704 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn1O88704 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn1O88704 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn1O88704 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn1O88704 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn1O88704 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn1O88704 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn1O88704 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn1O88704 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Hcn1O88704 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn1O88704 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn1O88704 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn1O88704 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn1O88704 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.12■□□□□ 0.17
Hcn1O88704 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn1O88704 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.12■□□□□ 0.17
Hcn1O88704 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.12■□□□□ 0.17
Hcn1O88704 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn1O88704 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.12■□□□□ 0.17
Hcn1O88704 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn1O88704 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn1O88704 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn1O88704 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn1O88704 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn1O88704 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Hcn1O88704 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn1O88704 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn1O88704 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn1O88704 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn1O88704 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn1O88704 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn1O88704 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms