Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Slc6a20bO88575 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a20bO88575 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a20bO88575 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a20bO88575 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a20bO88575 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Slc6a20bO88575 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a20bO88575 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Slc6a20bO88575 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a20bO88575 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.36■□□□□ 0.53
Slc6a20bO88575 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a20bO88575 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Slc6a20bO88575 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a20bO88575 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Slc6a20bO88575 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a20bO88575 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20bO88575 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20bO88575 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20bO88575 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20bO88575 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20bO88575 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.35■□□□□ 0.53
Slc6a20bO88575 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.35■□□□□ 0.53
Slc6a20bO88575 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.35■□□□□ 0.53
Slc6a20bO88575 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20bO88575 Gm7063-201ENSMUST00000186840 981 ntBASIC18.35■□□□□ 0.53
Slc6a20bO88575 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.35■□□□□ 0.53
Slc6a20bO88575 Gm2756-201ENSMUST00000195851 400 ntBASIC18.35■□□□□ 0.53
Slc6a20bO88575 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20bO88575 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20bO88575 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20bO88575 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20bO88575 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20bO88575 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20bO88575 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20bO88575 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Slc6a20bO88575 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.35■□□□□ 0.53
Slc6a20bO88575 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a20bO88575 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.35■□□□□ 0.53
Slc6a20bO88575 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Slc6a20bO88575 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20bO88575 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20bO88575 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Slc6a20bO88575 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20bO88575 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20bO88575 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20bO88575 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20bO88575 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20bO88575 Gm4995-201ENSMUST00000117247 432 ntBASIC18.34■□□□□ 0.53
Slc6a20bO88575 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20bO88575 Gm12260-201ENSMUST00000122447 411 ntBASIC18.34■□□□□ 0.53
Slc6a20bO88575 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Slc6a20bO88575 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.34■□□□□ 0.53
Slc6a20bO88575 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20bO88575 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.34■□□□□ 0.53
Slc6a20bO88575 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Slc6a20bO88575 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Slc6a20bO88575 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20bO88575 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20bO88575 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20bO88575 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a20bO88575 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a20bO88575 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a20bO88575 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a20bO88575 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.33■□□□□ 0.53
Slc6a20bO88575 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a20bO88575 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a20bO88575 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a20bO88575 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a20bO88575 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.33■□□□□ 0.52
Slc6a20bO88575 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.33■□□□□ 0.52
Slc6a20bO88575 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.33■□□□□ 0.52
Slc6a20bO88575 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.33■□□□□ 0.52
Slc6a20bO88575 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.33■□□□□ 0.52
Slc6a20bO88575 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a20bO88575 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.33■□□□□ 0.52
Slc6a20bO88575 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a20bO88575 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a20bO88575 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a20bO88575 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a20bO88575 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a20bO88575 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a20bO88575 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.32■□□□□ 0.52
Slc6a20bO88575 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.32■□□□□ 0.52
Slc6a20bO88575 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a20bO88575 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a20bO88575 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms