Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Cldn1O88551 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn1O88551 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cldn1O88551 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.44□□□□□ -0.1
Cldn1O88551 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cldn1O88551 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.44□□□□□ -0.1
Cldn1O88551 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cldn1O88551 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.44□□□□□ -0.1
Cldn1O88551 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn1O88551 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cldn1O88551 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn1O88551 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.43□□□□□ -0.1
Cldn1O88551 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Cldn1O88551 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn1O88551 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn1O88551 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Cldn1O88551 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cldn1O88551 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn1O88551 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn1O88551 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cldn1O88551 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn1O88551 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn1O88551 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Cldn1O88551 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.43□□□□□ -0.1
Cldn1O88551 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn1O88551 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cldn1O88551 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn1O88551 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn1O88551 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn1O88551 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.42□□□□□ -0.1
Cldn1O88551 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cldn1O88551 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn1O88551 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn1O88551 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.42□□□□□ -0.1
Cldn1O88551 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn1O88551 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn1O88551 Gm10418-201ENSMUST00000100943 576 ntBASIC14.42□□□□□ -0.1
Cldn1O88551 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cldn1O88551 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.42□□□□□ -0.1
Cldn1O88551 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.42□□□□□ -0.1
Cldn1O88551 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.42□□□□□ -0.1
Cldn1O88551 Gm43347-201ENSMUST00000200226 580 ntBASIC14.42□□□□□ -0.1
Cldn1O88551 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn1O88551 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn1O88551 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn1O88551 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Cldn1O88551 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn1O88551 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn1O88551 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn1O88551 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cldn1O88551 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn1O88551 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn1O88551 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn1O88551 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn1O88551 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cldn1O88551 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn1O88551 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn1O88551 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.41□□□□□ -0.1
Cldn1O88551 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cldn1O88551 Actl10-202ENSMUST00000226583 1501 ntBASIC14.41□□□□□ -0.1
Cldn1O88551 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn1O88551 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn1O88551 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.41□□□□□ -0.1
Cldn1O88551 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn1O88551 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn1O88551 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn1O88551 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.41□□□□□ -0.1
Cldn1O88551 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.41□□□□□ -0.1
Cldn1O88551 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cldn1O88551 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.41□□□□□ -0.1
Cldn1O88551 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn1O88551 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn1O88551 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn1O88551 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cldn1O88551 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms