Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.86■■□□□ 1.09
Ubr1O70481 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ubr1O70481 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ubr1O70481 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ubr1O70481 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ubr1O70481 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ubr1O70481 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC21.85■■□□□ 1.09
Ubr1O70481 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC21.85■■□□□ 1.09
Ubr1O70481 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC21.85■■□□□ 1.09
Ubr1O70481 Vti1a-206ENSMUST00000225529 1244 ntBASIC21.85■■□□□ 1.09
Ubr1O70481 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.85■■□□□ 1.09
Ubr1O70481 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ubr1O70481 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ubr1O70481 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ubr1O70481 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Ubr1O70481 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC21.84■■□□□ 1.09
Ubr1O70481 Gm18206-201ENSMUST00000207027 926 ntBASIC21.84■■□□□ 1.09
Ubr1O70481 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC21.84■■□□□ 1.09
Ubr1O70481 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ubr1O70481 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Ubr1O70481 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ubr1O70481 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ubr1O70481 Gm25990-201ENSMUST00000102440 86 ntBASIC21.84■■□□□ 1.09
Ubr1O70481 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ubr1O70481 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ubr1O70481 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ubr1O70481 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC21.84■■□□□ 1.09
Ubr1O70481 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.83■■□□□ 1.09
Ubr1O70481 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ubr1O70481 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ubr1O70481 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.83■■□□□ 1.09
Ubr1O70481 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ubr1O70481 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ubr1O70481 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ubr1O70481 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ubr1O70481 Gm12350-201ENSMUST00000121208 462 ntBASIC21.83■■□□□ 1.09
Ubr1O70481 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC21.83■■□□□ 1.09
Ubr1O70481 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ubr1O70481 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC21.83■■□□□ 1.09
Ubr1O70481 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC21.83■■□□□ 1.09
Ubr1O70481 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC21.83■■□□□ 1.09
Ubr1O70481 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ubr1O70481 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ubr1O70481 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ubr1O70481 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ubr1O70481 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ubr1O70481 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ubr1O70481 Gm25745-201ENSMUST00000174945 133 ntBASIC21.82■■□□□ 1.08
Ubr1O70481 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ubr1O70481 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ubr1O70481 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC21.82■■□□□ 1.08
Ubr1O70481 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Ubr1O70481 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ubr1O70481 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ubr1O70481 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ubr1O70481 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Ubr1O70481 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ubr1O70481 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ubr1O70481 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ubr1O70481 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Ubr1O70481 Gm18195-201ENSMUST00000207604 706 ntBASIC21.82■■□□□ 1.08
Ubr1O70481 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr1O70481 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.81■■□□□ 1.08
Ubr1O70481 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr1O70481 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr1O70481 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr1O70481 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr1O70481 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr1O70481 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC21.81■■□□□ 1.08
Ubr1O70481 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr1O70481 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Ubr1O70481 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubr1O70481 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Ubr1O70481 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC21.8■■□□□ 1.08
Ubr1O70481 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ubr1O70481 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ubr1O70481 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Ubr1O70481 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Ubr1O70481 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ubr1O70481 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ubr1O70481 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Ubr1O70481 Gm7230-201ENSMUST00000173026 815 ntBASIC21.8■■□□□ 1.08
Ubr1O70481 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Ubr1O70481 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ubr1O70481 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ubr1O70481 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ubr1O70481 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ubr1O70481 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ubr1O70481 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.8■■□□□ 1.08
Ubr1O70481 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ubr1O70481 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Ubr1O70481 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ubr1O70481 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ubr1O70481 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ubr1O70481 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ubr1O70481 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ubr1O70481 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Ubr1O70481 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ubr1O70481 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ubr1O70481 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms