Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Gm10167-201ENSMUST00000150411 1479 ntBASIC11.93□□□□□ -0.5
Vamp8O70404 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vamp8O70404 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Vamp8O70404 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vamp8O70404 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vamp8O70404 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Vamp8O70404 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vamp8O70404 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vamp8O70404 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vamp8O70404 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vamp8O70404 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vamp8O70404 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vamp8O70404 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.93□□□□□ -0.5
Vamp8O70404 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vamp8O70404 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vamp8O70404 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Vamp8O70404 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vamp8O70404 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vamp8O70404 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vamp8O70404 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.92□□□□□ -0.5
Vamp8O70404 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC11.92□□□□□ -0.5
Vamp8O70404 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vamp8O70404 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vamp8O70404 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vamp8O70404 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Vamp8O70404 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Vamp8O70404 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vamp8O70404 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Vamp8O70404 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC11.92□□□□□ -0.5
Vamp8O70404 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vamp8O70404 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vamp8O70404 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Vamp8O70404 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vamp8O70404 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vamp8O70404 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vamp8O70404 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vamp8O70404 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vamp8O70404 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vamp8O70404 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vamp8O70404 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vamp8O70404 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC11.91□□□□□ -0.5
Vamp8O70404 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Vamp8O70404 Gm16499-203ENSMUST00000204633 2177 ntBASIC11.91□□□□□ -0.5
Vamp8O70404 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Vamp8O70404 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC11.91□□□□□ -0.5
Vamp8O70404 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC11.91□□□□□ -0.5
Vamp8O70404 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC11.91□□□□□ -0.5
Vamp8O70404 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC11.91□□□□□ -0.5
Vamp8O70404 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC11.91□□□□□ -0.5
Vamp8O70404 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Vamp8O70404 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.91□□□□□ -0.5
Vamp8O70404 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.91□□□□□ -0.5
Vamp8O70404 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vamp8O70404 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vamp8O70404 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vamp8O70404 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vamp8O70404 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vamp8O70404 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC11.9□□□□□ -0.5
Vamp8O70404 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Vamp8O70404 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
Vamp8O70404 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vamp8O70404 AC125311.2-201ENSMUST00000227477 1940 ntBASIC11.9□□□□□ -0.5
Vamp8O70404 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vamp8O70404 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vamp8O70404 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vamp8O70404 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vamp8O70404 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vamp8O70404 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vamp8O70404 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vamp8O70404 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vamp8O70404 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vamp8O70404 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vamp8O70404 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vamp8O70404 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Vamp8O70404 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms