Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Mmp8O70138 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp8O70138 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Mmp8O70138 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Mmp8O70138 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp8O70138 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp8O70138 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp8O70138 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Mmp8O70138 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp8O70138 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Mmp8O70138 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp8O70138 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.56■□□□□ 0.88
Mmp8O70138 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.56■□□□□ 0.88
Mmp8O70138 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp8O70138 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp8O70138 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp8O70138 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp8O70138 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp8O70138 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp8O70138 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Mmp8O70138 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Mmp8O70138 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp8O70138 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp8O70138 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Mmp8O70138 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp8O70138 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Mmp8O70138 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp8O70138 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp8O70138 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp8O70138 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp8O70138 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp8O70138 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp8O70138 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp8O70138 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.55■□□□□ 0.88
Mmp8O70138 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp8O70138 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp8O70138 Gm10013-201ENSMUST00000106074 672 ntBASIC20.55■□□□□ 0.88
Mmp8O70138 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.55■□□□□ 0.88
Mmp8O70138 Gm27389-201ENSMUST00000183622 195 ntBASIC20.55■□□□□ 0.88
Mmp8O70138 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp8O70138 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp8O70138 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp8O70138 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Mmp8O70138 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp8O70138 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp8O70138 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp8O70138 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp8O70138 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.54■□□□□ 0.88
Mmp8O70138 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.54■□□□□ 0.88
Mmp8O70138 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp8O70138 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp8O70138 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp8O70138 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.54■□□□□ 0.88
Mmp8O70138 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp8O70138 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
Mmp8O70138 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Mmp8O70138 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp8O70138 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Mmp8O70138 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp8O70138 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp8O70138 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp8O70138 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp8O70138 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp8O70138 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
Mmp8O70138 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp8O70138 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Mmp8O70138 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.53■□□□□ 0.88
Mmp8O70138 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.53■□□□□ 0.88
Mmp8O70138 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.53■□□□□ 0.88
Mmp8O70138 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp8O70138 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp8O70138 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp8O70138 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp8O70138 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp8O70138 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp8O70138 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp8O70138 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp8O70138 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp8O70138 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp8O70138 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp8O70138 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp8O70138 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp8O70138 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp8O70138 Gm11336-201ENSMUST00000118168 334 ntBASIC20.52■□□□□ 0.88
Mmp8O70138 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp8O70138 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.52■□□□□ 0.88
Mmp8O70138 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp8O70138 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp8O70138 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Mmp8O70138 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Mmp8O70138 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp8O70138 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp8O70138 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp8O70138 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp8O70138 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp8O70138 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp8O70138 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp8O70138 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp8O70138 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp8O70138 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms