Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Kcnu1O54982 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Kcnu1O54982 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Kcnu1O54982 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Kcnu1O54982 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Kcnu1O54982 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Kcnu1O54982 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Kcnu1O54982 Mir5122-201ENSMUST00000175004 89 ntBASIC17.96■□□□□ 0.47
Kcnu1O54982 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.96■□□□□ 0.47
Kcnu1O54982 Gm21814-202ENSMUST00000203277 873 ntBASIC17.96■□□□□ 0.47
Kcnu1O54982 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.96■□□□□ 0.47
Kcnu1O54982 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Kcnu1O54982 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Kcnu1O54982 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Kcnu1O54982 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Kcnu1O54982 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Kcnu1O54982 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Kcnu1O54982 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Kcnu1O54982 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Kcnu1O54982 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Kcnu1O54982 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Kcnu1O54982 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.95■□□□□ 0.46
Kcnu1O54982 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcnu1O54982 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcnu1O54982 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcnu1O54982 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcnu1O54982 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcnu1O54982 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Kcnu1O54982 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcnu1O54982 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcnu1O54982 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.95■□□□□ 0.46
Kcnu1O54982 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcnu1O54982 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.95■□□□□ 0.46
Kcnu1O54982 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcnu1O54982 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.95■□□□□ 0.46
Kcnu1O54982 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Kcnu1O54982 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Kcnu1O54982 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcnu1O54982 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcnu1O54982 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcnu1O54982 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Kcnu1O54982 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Kcnu1O54982 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcnu1O54982 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcnu1O54982 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcnu1O54982 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcnu1O54982 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcnu1O54982 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcnu1O54982 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcnu1O54982 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcnu1O54982 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcnu1O54982 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Kcnu1O54982 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Kcnu1O54982 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcnu1O54982 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Kcnu1O54982 Gm10812-201ENSMUST00000099864 546 ntBASIC17.94■□□□□ 0.46
Kcnu1O54982 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Kcnu1O54982 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Kcnu1O54982 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Kcnu1O54982 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Kcnu1O54982 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.94■□□□□ 0.46
Kcnu1O54982 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcnu1O54982 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Kcnu1O54982 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcnu1O54982 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcnu1O54982 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Kcnu1O54982 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Kcnu1O54982 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcnu1O54982 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.93■□□□□ 0.46
Kcnu1O54982 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.93■□□□□ 0.46
Kcnu1O54982 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcnu1O54982 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcnu1O54982 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcnu1O54982 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcnu1O54982 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.93■□□□□ 0.46
Kcnu1O54982 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Kcnu1O54982 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcnu1O54982 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcnu1O54982 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Kcnu1O54982 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.93■□□□□ 0.46
Kcnu1O54982 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Kcnu1O54982 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Kcnu1O54982 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Kcnu1O54982 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Kcnu1O54982 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Kcnu1O54982 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Kcnu1O54982 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Kcnu1O54982 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Kcnu1O54982 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Kcnu1O54982 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Kcnu1O54982 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.92■□□□□ 0.46
Kcnu1O54982 Gm18958-201ENSMUST00000174258 762 ntBASIC17.92■□□□□ 0.46
Kcnu1O54982 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Kcnu1O54982 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Kcnu1O54982 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Kcnu1O54982 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Kcnu1O54982 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Kcnu1O54982 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Kcnu1O54982 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Kcnu1O54982 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms