Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ChkaO54804 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ChkaO54804 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ChkaO54804 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ChkaO54804 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ChkaO54804 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ChkaO54804 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ChkaO54804 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
ChkaO54804 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ChkaO54804 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ChkaO54804 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ChkaO54804 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ChkaO54804 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ChkaO54804 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ChkaO54804 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.02■□□□□ 0.32
ChkaO54804 Gm7638-201ENSMUST00000121348 967 ntBASIC17.02■□□□□ 0.32
ChkaO54804 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ChkaO54804 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ChkaO54804 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ChkaO54804 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ChkaO54804 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ChkaO54804 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
ChkaO54804 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ChkaO54804 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ChkaO54804 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ChkaO54804 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ChkaO54804 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ChkaO54804 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.01■□□□□ 0.31
ChkaO54804 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ChkaO54804 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ChkaO54804 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ChkaO54804 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ChkaO54804 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ChkaO54804 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ChkaO54804 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ChkaO54804 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ChkaO54804 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ChkaO54804 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ChkaO54804 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ChkaO54804 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ChkaO54804 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ChkaO54804 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ChkaO54804 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ChkaO54804 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ChkaO54804 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ChkaO54804 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.01■□□□□ 0.31
ChkaO54804 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17■□□□□ 0.31
ChkaO54804 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17■□□□□ 0.31
ChkaO54804 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ChkaO54804 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ChkaO54804 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ChkaO54804 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ChkaO54804 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17■□□□□ 0.31
ChkaO54804 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ChkaO54804 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ChkaO54804 Mir1199-201ENSMUST00000117015 119 ntBASIC17■□□□□ 0.31
ChkaO54804 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17■□□□□ 0.31
ChkaO54804 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17■□□□□ 0.31
ChkaO54804 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17■□□□□ 0.31
ChkaO54804 Gm38027-201ENSMUST00000192315 235 ntBASIC17■□□□□ 0.31
ChkaO54804 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ChkaO54804 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ChkaO54804 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ChkaO54804 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17■□□□□ 0.31
ChkaO54804 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17■□□□□ 0.31
ChkaO54804 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ChkaO54804 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ChkaO54804 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17■□□□□ 0.31
ChkaO54804 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ChkaO54804 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17■□□□□ 0.31
ChkaO54804 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ChkaO54804 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ChkaO54804 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ChkaO54804 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ChkaO54804 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ChkaO54804 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ChkaO54804 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ChkaO54804 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ChkaO54804 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ChkaO54804 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.99■□□□□ 0.31
ChkaO54804 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.99■□□□□ 0.31
ChkaO54804 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ChkaO54804 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ChkaO54804 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
ChkaO54804 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ChkaO54804 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ChkaO54804 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ChkaO54804 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.99■□□□□ 0.31
ChkaO54804 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.99■□□□□ 0.31
ChkaO54804 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ChkaO54804 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ChkaO54804 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ChkaO54804 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ChkaO54804 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ChkaO54804 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ChkaO54804 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
ChkaO54804 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ChkaO54804 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ChkaO54804 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ChkaO54804 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms