Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ccr6O54689 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.2□□□□□ -0.14
Ccr6O54689 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccr6O54689 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccr6O54689 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccr6O54689 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccr6O54689 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccr6O54689 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccr6O54689 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccr6O54689 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccr6O54689 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccr6O54689 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccr6O54689 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ccr6O54689 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.2□□□□□ -0.14
Ccr6O54689 Gm43017-201ENSMUST00000198296 752 ntBASIC14.2□□□□□ -0.14
Ccr6O54689 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccr6O54689 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccr6O54689 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccr6O54689 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccr6O54689 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccr6O54689 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccr6O54689 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Ccr6O54689 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ccr6O54689 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccr6O54689 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccr6O54689 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccr6O54689 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccr6O54689 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccr6O54689 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccr6O54689 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccr6O54689 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccr6O54689 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccr6O54689 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccr6O54689 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccr6O54689 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccr6O54689 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccr6O54689 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.19□□□□□ -0.14
Ccr6O54689 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Ccr6O54689 Gm42778-201ENSMUST00000199644 553 ntBASIC14.19□□□□□ -0.14
Ccr6O54689 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccr6O54689 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccr6O54689 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccr6O54689 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Ccr6O54689 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccr6O54689 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccr6O54689 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccr6O54689 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.19□□□□□ -0.14
Ccr6O54689 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccr6O54689 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccr6O54689 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ccr6O54689 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccr6O54689 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccr6O54689 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ccr6O54689 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.18□□□□□ -0.14
Ccr6O54689 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 Gm11643-201ENSMUST00000119578 864 ntBASIC14.18□□□□□ -0.14
Ccr6O54689 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccr6O54689 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccr6O54689 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccr6O54689 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Gm2399-201ENSMUST00000104944 225 ntBASIC14.17□□□□□ -0.14
Ccr6O54689 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Gm12821-201ENSMUST00000120022 600 ntBASIC14.17□□□□□ -0.14
Ccr6O54689 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.17□□□□□ -0.14
Ccr6O54689 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms