Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Efnb3O35393 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Efnb3O35393 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Efnb3O35393 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Efnb3O35393 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Efnb3O35393 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Efnb3O35393 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Efnb3O35393 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Efnb3O35393 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Efnb3O35393 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Efnb3O35393 Gm13148-201ENSMUST00000118892 745 ntBASIC13.35□□□□□ -0.27
Efnb3O35393 Gm11643-201ENSMUST00000119578 864 ntBASIC13.35□□□□□ -0.27
Efnb3O35393 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.35□□□□□ -0.27
Efnb3O35393 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.35□□□□□ -0.27
Efnb3O35393 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Efnb3O35393 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Efnb3O35393 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Efnb3O35393 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Efnb3O35393 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Efnb3O35393 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.35□□□□□ -0.27
Efnb3O35393 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.35□□□□□ -0.27
Efnb3O35393 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Efnb3O35393 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Efnb3O35393 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Efnb3O35393 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Efnb3O35393 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Efnb3O35393 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Efnb3O35393 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Efnb3O35393 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Efnb3O35393 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Efnb3O35393 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Efnb3O35393 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Efnb3O35393 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Efnb3O35393 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Efnb3O35393 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Efnb3O35393 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Efnb3O35393 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Efnb3O35393 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Efnb3O35393 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Efnb3O35393 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Efnb3O35393 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Efnb3O35393 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Efnb3O35393 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Efnb3O35393 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Efnb3O35393 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Efnb3O35393 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Efnb3O35393 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Efnb3O35393 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Efnb3O35393 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Efnb3O35393 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Efnb3O35393 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Efnb3O35393 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Efnb3O35393 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
Efnb3O35393 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Efnb3O35393 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Efnb3O35393 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Efnb3O35393 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Efnb3O35393 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Efnb3O35393 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Efnb3O35393 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Efnb3O35393 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Efnb3O35393 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Efnb3O35393 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Efnb3O35393 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Efnb3O35393 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.33□□□□□ -0.28
Efnb3O35393 Gm26524-201ENSMUST00000192339 390 ntBASIC13.33□□□□□ -0.28
Efnb3O35393 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.33□□□□□ -0.28
Efnb3O35393 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Efnb3O35393 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Efnb3O35393 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Efnb3O35393 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Efnb3O35393 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Efnb3O35393 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Efnb3O35393 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Efnb3O35393 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Efnb3O35393 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Efnb3O35393 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Efnb3O35393 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.33□□□□□ -0.28
Efnb3O35393 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Efnb3O35393 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Efnb3O35393 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Efnb3O35393 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Efnb3O35393 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Efnb3O35393 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.32□□□□□ -0.28
Efnb3O35393 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Efnb3O35393 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Efnb3O35393 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Efnb3O35393 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Efnb3O35393 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Efnb3O35393 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Efnb3O35393 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Efnb3O35393 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.32□□□□□ -0.28
Efnb3O35393 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms