Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col15a1O35206 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col15a1O35206 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col15a1O35206 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col15a1O35206 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Col15a1O35206 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Col15a1O35206 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Col15a1O35206 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col15a1O35206 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col15a1O35206 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col15a1O35206 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Col15a1O35206 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col15a1O35206 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col15a1O35206 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col15a1O35206 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC21.6■■□□□ 1.05
Col15a1O35206 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col15a1O35206 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col15a1O35206 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col15a1O35206 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col15a1O35206 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col15a1O35206 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC21.59■■□□□ 1.05
Col15a1O35206 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col15a1O35206 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col15a1O35206 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col15a1O35206 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col15a1O35206 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC21.59■■□□□ 1.05
Col15a1O35206 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col15a1O35206 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC21.59■■□□□ 1.05
Col15a1O35206 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col15a1O35206 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col15a1O35206 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Col15a1O35206 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Col15a1O35206 Gm32996-201ENSMUST00000199828 1447 ntBASIC21.58■■□□□ 1.05
Col15a1O35206 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col15a1O35206 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Col15a1O35206 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
Col15a1O35206 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC21.58■■□□□ 1.04
Col15a1O35206 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col15a1O35206 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col15a1O35206 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Col15a1O35206 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.57■■□□□ 1.04
Col15a1O35206 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col15a1O35206 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col15a1O35206 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col15a1O35206 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col15a1O35206 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col15a1O35206 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC21.57■■□□□ 1.04
Col15a1O35206 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col15a1O35206 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col15a1O35206 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col15a1O35206 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Col15a1O35206 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col15a1O35206 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col15a1O35206 Gm16499-203ENSMUST00000204633 2177 ntBASIC21.57■■□□□ 1.04
Col15a1O35206 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col15a1O35206 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Col15a1O35206 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC21.57■■□□□ 1.04
Col15a1O35206 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC21.57■■□□□ 1.04
Col15a1O35206 CT009713.7-201ENSMUST00000224689 571 ntBASIC21.57■■□□□ 1.04
Col15a1O35206 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col15a1O35206 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col15a1O35206 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Col15a1O35206 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col15a1O35206 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col15a1O35206 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col15a1O35206 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC21.56■■□□□ 1.04
Col15a1O35206 Gm18856-201ENSMUST00000178096 1374 ntBASIC21.56■■□□□ 1.04
Col15a1O35206 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col15a1O35206 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col15a1O35206 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col15a1O35206 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col15a1O35206 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col15a1O35206 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC21.56■■□□□ 1.04
Col15a1O35206 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC21.56■■□□□ 1.04
Col15a1O35206 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC21.56■■□□□ 1.04
Col15a1O35206 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC21.56■■□□□ 1.04
Col15a1O35206 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col15a1O35206 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col15a1O35206 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col15a1O35206 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col15a1O35206 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col15a1O35206 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col15a1O35206 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col15a1O35206 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col15a1O35206 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col15a1O35206 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col15a1O35206 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col15a1O35206 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col15a1O35206 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
Col15a1O35206 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.55■■□□□ 1.04
Col15a1O35206 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col15a1O35206 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col15a1O35206 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col15a1O35206 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col15a1O35206 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col15a1O35206 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col15a1O35206 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col15a1O35206 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col15a1O35206 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col15a1O35206 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms