Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ebf3O08791 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ebf3O08791 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.49■□□□□ 0.39
Ebf3O08791 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.48■□□□□ 0.39
Ebf3O08791 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.48■□□□□ 0.39
Ebf3O08791 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 Gm18958-201ENSMUST00000174258 762 ntBASIC17.48■□□□□ 0.39
Ebf3O08791 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ebf3O08791 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf3O08791 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf3O08791 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf3O08791 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf3O08791 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ebf3O08791 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf3O08791 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf3O08791 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf3O08791 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.47■□□□□ 0.39
Ebf3O08791 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.47■□□□□ 0.39
Ebf3O08791 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf3O08791 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.47■□□□□ 0.39
Ebf3O08791 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Ebf3O08791 Gm7461-201ENSMUST00000058918 827 ntBASIC17.47■□□□□ 0.39
Ebf3O08791 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf3O08791 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf3O08791 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf3O08791 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf3O08791 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ebf3O08791 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.47■□□□□ 0.39
Ebf3O08791 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.46■□□□□ 0.39
Ebf3O08791 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ebf3O08791 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf3O08791 Mir770-201ENSMUST00000103252 94 ntBASIC17.46■□□□□ 0.39
Ebf3O08791 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Ebf3O08791 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf3O08791 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf3O08791 Gm37722-201ENSMUST00000193757 208 ntBASIC17.46■□□□□ 0.39
Ebf3O08791 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf3O08791 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ebf3O08791 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf3O08791 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.46■□□□□ 0.39
Ebf3O08791 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf3O08791 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ebf3O08791 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf3O08791 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ebf3O08791 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.45■□□□□ 0.38
Ebf3O08791 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.45■□□□□ 0.38
Ebf3O08791 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ebf3O08791 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.45■□□□□ 0.38
Ebf3O08791 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Ebf3O08791 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Ebf3O08791 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.45■□□□□ 0.38
Ebf3O08791 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ebf3O08791 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Ebf3O08791 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf3O08791 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.44■□□□□ 0.38
Ebf3O08791 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Ebf3O08791 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf3O08791 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.44■□□□□ 0.38
Ebf3O08791 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ebf3O08791 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf3O08791 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ebf3O08791 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms