Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Tcof1O08784 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Tcof1O08784 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.73■□□□□ 0.75
Tcof1O08784 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.73■□□□□ 0.75
Tcof1O08784 Gm27741-201ENSMUST00000185060 237 ntBASIC19.73■□□□□ 0.75
Tcof1O08784 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tcof1O08784 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Tcof1O08784 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tcof1O08784 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tcof1O08784 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tcof1O08784 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tcof1O08784 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tcof1O08784 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tcof1O08784 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tcof1O08784 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tcof1O08784 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tcof1O08784 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tcof1O08784 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Tcof1O08784 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tcof1O08784 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tcof1O08784 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tcof1O08784 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tcof1O08784 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tcof1O08784 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.71■□□□□ 0.75
Tcof1O08784 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tcof1O08784 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tcof1O08784 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tcof1O08784 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tcof1O08784 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.71■□□□□ 0.75
Tcof1O08784 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tcof1O08784 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.71■□□□□ 0.75
Tcof1O08784 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.71■□□□□ 0.75
Tcof1O08784 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.71■□□□□ 0.75
Tcof1O08784 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tcof1O08784 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tcof1O08784 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tcof1O08784 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Tcof1O08784 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Tcof1O08784 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcof1O08784 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tcof1O08784 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Tcof1O08784 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Tcof1O08784 Gm13186-201ENSMUST00000118031 316 ntBASIC19.7■□□□□ 0.74
Tcof1O08784 Gm11355-201ENSMUST00000121120 306 ntBASIC19.7■□□□□ 0.74
Tcof1O08784 Gm37722-201ENSMUST00000193757 208 ntBASIC19.7■□□□□ 0.74
Tcof1O08784 Gm5587-201ENSMUST00000206270 674 ntBASIC19.7■□□□□ 0.74
Tcof1O08784 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcof1O08784 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcof1O08784 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcof1O08784 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcof1O08784 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcof1O08784 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcof1O08784 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcof1O08784 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tcof1O08784 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcof1O08784 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcof1O08784 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tcof1O08784 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcof1O08784 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcof1O08784 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcof1O08784 Phf7-203ENSMUST00000226565 1971 ntBASIC19.69■□□□□ 0.74
Tcof1O08784 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tcof1O08784 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.69■□□□□ 0.74
Tcof1O08784 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcof1O08784 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcof1O08784 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tcof1O08784 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.69■□□□□ 0.74
Tcof1O08784 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcof1O08784 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcof1O08784 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcof1O08784 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tcof1O08784 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.69■□□□□ 0.74
Tcof1O08784 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tcof1O08784 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.69■□□□□ 0.74
Tcof1O08784 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcof1O08784 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcof1O08784 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcof1O08784 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcof1O08784 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcof1O08784 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Tcof1O08784 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Tcof1O08784 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Tcof1O08784 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcof1O08784 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcof1O08784 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Tcof1O08784 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcof1O08784 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Tcof1O08784 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcof1O08784 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Tcof1O08784 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.68■□□□□ 0.74
Tcof1O08784 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tcof1O08784 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcof1O08784 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcof1O08784 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tcof1O08784 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcof1O08784 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcof1O08784 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcof1O08784 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcof1O08784 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcof1O08784 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms