Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-3J3QMG8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-3J3QMG8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-3J3QMG8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-3J3QMG8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-3J3QMG8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-3J3QMG8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-3J3QMG8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-3J3QMG8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-3J3QMG8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-3J3QMG8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Gm11539-201ENSMUST00000119837 557 ntBASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Gm13436-201ENSMUST00000120418 567 ntBASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.82□□□□□ -0.04
Trav13d-3J3QMG8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Gm10252-201ENSMUST00000209541 832 ntBASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-3J3QMG8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Gm13216-201ENSMUST00000117145 591 ntBASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-3J3QMG8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Trav13d-3J3QMG8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms